Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B08
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021350-1|AAX33498.2|  155|Drosophila melanogaster LP19160p pro...    32   0.78 
AE014296-2688|AAF49499.1|  155|Drosophila melanogaster CG13044-P...    32   0.78 
AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-P...    31   1.8  

>BT021350-1|AAX33498.2|  155|Drosophila melanogaster LP19160p
           protein.
          Length = 155

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = +2

Query: 179 TTGEHMSLAVSDRKKVITEWVK-VSKTTGLHIQVQVGGAPLADVLDLAAYCQDVGVDSLL 355
           T   H SL       V+ + V  V KTT +H    +  AP+   L   AY   +   + +
Sbjct: 54  TAVSHQSLTQVHSTPVVEDVVAPVVKTTAVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPV 113

Query: 356 TLPELYFKPATVAELVSYVELVANAAPKLPVLYYHIP 466
                Y  P T +  V+Y   ++ AAP  P+L +H P
Sbjct: 114 AYSS-YAAPLTYSAPVAYSAPLSYAAP-APLL-HHAP 147


>AE014296-2688|AAF49499.1|  155|Drosophila melanogaster CG13044-PA
           protein.
          Length = 155

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = +2

Query: 179 TTGEHMSLAVSDRKKVITEWVK-VSKTTGLHIQVQVGGAPLADVLDLAAYCQDVGVDSLL 355
           T   H SL       V+ + V  V KTT +H    +  AP+   L   AY   +   + +
Sbjct: 54  TAVSHQSLTQVHSTPVVEDVVAPVVKTTAVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPV 113

Query: 356 TLPELYFKPATVAELVSYVELVANAAPKLPVLYYHIP 466
                Y  P T +  V+Y   ++ AAP  P+L +H P
Sbjct: 114 AYSS-YAAPLTYSAPVAYSAPLSYAAP-APLL-HHAP 147


>AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-PA
           protein.
          Length = 881

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -1

Query: 342 TPTSWQYAARSKTSASGAP-PTCT*ICSPVVLDTLTHSVITFFLSDTASDICSPVVPPTR 166
           TPT+      + T+ +    PT T  C+P    T T +  T   + T +  C+P    T 
Sbjct: 491 TPTTTTTTTTTTTTTTTTTTPTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTT 550

Query: 165 T 163
           T
Sbjct: 551 T 551



 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/61 (24%), Positives = 25/61 (40%)
 Frame = -1

Query: 345 STPTSWQYAARSKTSASGAPPTCT*ICSPVVLDTLTHSVITFFLSDTASDICSPVVPPTR 166
           +T T+      + T+ +    T T  C+P    T T +  T   + T +  C+P    T 
Sbjct: 409 TTTTTSTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTT 468

Query: 165 T 163
           T
Sbjct: 469 T 469


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,920,843
Number of Sequences: 53049
Number of extensions: 643417
Number of successful extensions: 1354
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)