Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_B02
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 40 0.002
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 34 0.099
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.099
SB_15403| Best HMM Match : CH (HMM E-Value=0) 34 0.099
SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.099
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.23
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 32 0.30
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 0.70
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 31 0.70
SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 1.2
SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12) 30 1.6
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 1.6
SB_45072| Best HMM Match : Kazal_2 (HMM E-Value=5.8e-06) 30 1.6
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 29 2.8
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 2.8
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 29 3.7
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 4.9
SB_12951| Best HMM Match : Radial_spoke_3 (HMM E-Value=0) 28 4.9
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 27 8.6
SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSNP 502
CMR C T E NPVCGSD +TY NP
Sbjct: 118 CMRRC--TKELNPVCGSDGKTYDNP 140
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 422 EECMRTCPVTPEFNPVCGSDYQTYSNP---GRLTC 517
+ C+R CP + PVCG+D +TY N G TC
Sbjct: 42 DPCVRPCPAI--YMPVCGTDGKTYGNKCMLGAATC 74
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 422 EECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCA 520
++C C + PVCGSD TYSNP L A
Sbjct: 167 DKCAPIC--NKMYQPVCGSDNVTYSNPCMLRSA 197
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 33.9 bits (74), Expect = 0.099
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 422 EECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCA 520
++C CP + PVCGSD TYSNP L A
Sbjct: 38 DKCAPICPKI--YRPVCGSDNVTYSNPCMLRSA 68
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 33.9 bits (74), Expect = 0.099
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQACGVHVSLS 550
C C T E+ PVCGSD +TY NP L ++C + +S
Sbjct: 42 CNEAC--TREYAPVCGSDGKTYPNPCALE-VESCKTNTRIS 79
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQAC 529
EC + C T ++ PVCGSD +TY+N L +AC
Sbjct: 195 ECPKVC--TLDYTPVCGSDNKTYANLCNLE-VEAC 226
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSN 499
EC R C T E PVCG+D +TY N
Sbjct: 117 ECPRAC--TRELMPVCGTDQKTYDN 139
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSN 499
EC + C T E+ P CG+D TY N
Sbjct: 278 ECPKAC--TREYKPACGTDGNTYPN 300
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQ 523
+C+ + T E+ PVCGSD TY+N LT A+
Sbjct: 721 KCVCSAACTREYAPVCGSDGNTYNNLCLLTAAR 753
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 452 PEFNPVCGSDYQTYSNPGRLTCAQACGVHVSLSR 553
P ++P+CG+D +TY+N L A AC S+ R
Sbjct: 1241 PAYDPICGTDGKTYNNDKDLESA-ACAQQTSIVR 1273
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSN 499
EC R+CP PVCG D QTY N
Sbjct: 972 ECPRSCPSVNY--PVCGDDGQTYDN 994
>SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 33.9 bits (74), Expect = 0.099
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 440 CP--VTPEFNPVCGSDYQTYSNPGRLTCAQAC 529
CP VT ++NPVCGSD +TY N + Q C
Sbjct: 10 CPMAVTADYNPVCGSDGRTYPNRASME-VQGC 40
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQACGVHVSLS 550
EC CP E +PVCG D +TYS+ + A+AC S++
Sbjct: 802 ECNTECP--SEASPVCGQDGRTYSSTCAMD-ARACQAQTSIA 840
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSN 499
C R CP+T P+CGSD + Y N
Sbjct: 661 CSRACPIT--LRPLCGSDGKNYWN 682
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +2
Query: 422 EECMRTCPVTPEFNPVCGSDYQTYSNP---GRLTC 517
++C+R CP + PVCG+D +TY N G TC
Sbjct: 22 DKCVRPCPAIND--PVCGTDGKTYGNECMLGAATC 54
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQACGVHVSLS 550
EC CP T PVCGSD Y N L A+AC + +++
Sbjct: 1372 ECSEDCPKT--LKPVCGSDNNDYDNE-CLMQARACATNKTIT 1410
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSN 499
C +CP T +PVCGSD Q+Y N
Sbjct: 1720 CPPSCPNT--LDPVCGSDLQSYDN 1741
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSN 499
C + CP+T +PVC SD TY N
Sbjct: 1580 CPKICPIT--LDPVCASDNNTYPN 1601
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 437 TCP-VTPEFNPVCGSDYQTYSNPGRLTCAQAC 529
TCP + +PVCGSD +TY N R+ +AC
Sbjct: 608 TCPECSKREDPVCGSDSKTYPNECRMR-QEAC 638
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQACGVHVSLS 550
C C T + PVCGSD TY N L QAC + +++
Sbjct: 1206 CPENCSSTVD--PVCGSDNNTYDNE-CLMRQQACVANTTVA 1243
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQAC 529
EC + CP E VCG++++TY+N + QAC
Sbjct: 1789 ECPKDCP--KEDAEVCGTNWKTYTNECMMR-KQAC 1820
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +2
Query: 437 TCP--VTPEFNPVCGSDYQTYSN 499
+CP T E P+C SD QTY N
Sbjct: 2153 SCPDDCTNETKPICASDGQTYDN 2175
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQAC 529
C + CP T + PVCGSD +TY N L A AC
Sbjct: 3970 CNKNCPSTSK--PVCGSDGKTYKNECELKRA-AC 4000
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQACGVH 538
EC C P+ PVCG+D +TY N + A G H
Sbjct: 4236 ECPSRC--LPDKEPVCGADGKTYRNLCEIRKASCEGWH 4271
>SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 352
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 434 RTCPVTPEFNPVCGSDYQTYSNPGRLTCAQ 523
RTCP + PVCGSD +TY+N L A+
Sbjct: 238 RTCP--KQDKPVCGSDGKTYTNGCELATAK 265
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 422 EECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQACGV 535
++C R CP PVCGSD +YSN AQ V
Sbjct: 33 KDCSRPCPRI--LTPVCGSDRVSYSNMCAFRNAQCLAV 68
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 422 EECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCA 520
++C C + PVCGSD TYSNP L A
Sbjct: 24 DKCAPIC--NKMYQPVCGSDNVTYSNPCMLRSA 54
>SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQACGVHVSL 547
C CP E +PVCG+D +TY++ L A+ G V +
Sbjct: 206 CHEPCP--SEASPVCGTDMRTYASRCHLQLAKCKGHKVKM 243
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 440 CPV--TPEFNPVCGSDYQTYSNPGRLTCAQAC 529
CP+ T E+ PVCG+D +TY N + A AC
Sbjct: 1295 CPIFCTYEYMPVCGTDGKTYGNKCEMR-ASAC 1325
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 443 PVTPEFNPVCGSDYQTYSN 499
P T +++PVC SD QTY N
Sbjct: 1816 PCTADYSPVCASDGQTYPN 1834
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQAC 529
C CP+ ++PVCGSD YSN + A AC
Sbjct: 1367 CPSICPL--HYSPVCGSDGNMYSNECAMRAA-AC 1397
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSN 499
EC CP ++PVC S+ +TYSN
Sbjct: 1595 ECFSACPDI--YDPVCASNGKTYSN 1617
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQA 526
EC+ T E+ PVC SD + Y P R+T A
Sbjct: 1966 ECVCRTVTTLEYRPVCASDGKIY--PNRMTMENA 1997
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSN 499
C R CP + PVCGSD +TY+N
Sbjct: 1068 CPRRCP--KKLMPVCGSDGKTYNN 1089
>SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12)
Length = 77
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 449 TPEFNPVCGSDYQTYSNPGRLTCAQAC 529
T +++PVCGSD +TY N L A C
Sbjct: 33 TLQYDPVCGSDGKTYGNMCFLKAAIKC 59
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 440 CPVTPEFNPVCGSDYQTYSNPGRL 511
CP +F PVCGSD +TY N RL
Sbjct: 442 CP--RDFRPVCGSDLRTYVNLCRL 463
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 440 CPVTPEFNPVCGSDYQTYSNPGRL 511
CP E +PVCGSD +TY N +L
Sbjct: 513 CP--KEASPVCGSDGKTYENECKL 534
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 437 TCPV--TPEFNPVCGSDYQTYSNPGRLTCAQACGVHVSLS 550
+CP+ P PVCGSD ++Y + L +AC + L+
Sbjct: 1681 SCPIYCPPSGQPVCGSDGKSYGSECELR-KEACEAKIKLT 1719
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 458 FNPVCGSDYQTYSNPGRLTCAQAC 529
++PVCGS+ +TY N LT A+AC
Sbjct: 1830 YDPVCGSNRKTYLNFCSLT-AEAC 1852
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSN 499
C CP+ + PVCG+D +T+ N
Sbjct: 1538 CSSRCPLV--YKPVCGTDMETHIN 1559
>SB_45072| Best HMM Match : Kazal_2 (HMM E-Value=5.8e-06)
Length = 361
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 446 VTPEFNPVCGSDYQTYSNPGRLTC 517
V +FNPVCG+D TY P C
Sbjct: 138 VKSQFNPVCGADDVTYFTPCHAGC 161
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTYSN 499
EC+ CP PVCGSD TY N
Sbjct: 80 ECLSECP--DHIKPVCGSDGVTYPN 102
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 425 ECMRTCPVTPEFNPVCGSDYQTY 493
EC C T E+ PVCGSD +TY
Sbjct: 46 ECPMAC--TREYAPVCGSDGKTY 66
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = +2
Query: 437 TCP--VTPEFNPVCGSDYQTYSN 499
+CP T E++P+CGSD +TY N
Sbjct: 5153 SCPDICTFEYSPLCGSDGKTYDN 5175
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 428 CMRTCPVTPEFN-PVCGSDYQTYSN 499
CM C P N PVCGSD +TY+N
Sbjct: 5619 CM--CQSCPSINKPVCGSDGKTYNN 5641
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSN 499
C C T E+ PVCG+D Q+Y N
Sbjct: 5224 CNSIC--TLEYAPVCGTDGQSYDN 5245
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSN 499
C R C T + PVCG+D +TY N
Sbjct: 39 CNRAC--TKIYRPVCGTDGKTYGN 60
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 428 CMRTCPVTPEFNPVCGSDYQTYSNPGRLTCAQACGVHVSLS 550
C C T + PVCGSD TY N L QAC + +++
Sbjct: 275 CPENCSSTVD--PVCGSDNNTYDNE-CLMRQQACVANTTVA 312
>SB_12951| Best HMM Match : Radial_spoke_3 (HMM E-Value=0)
Length = 374
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 303 GSQIKDRCQIRGNSSSKHQLPLLLLPDPASVE*QR 407
G+ + DR +RGN+ ++ LP PDP ++ Q+
Sbjct: 45 GNIMYDRRIVRGNTYAQRTLPATAQPDPIEIQKQQ 79
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -3
Query: 337 PLIWQRSFIW-DPSLIGET 284
PL+W+RSF W +P ++G T
Sbjct: 882 PLLWERSFCWKNPVVLGYT 900
>SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 428 CMRTCPV-TPEFNPVCGSDYQTYSNPGRLTCAQACGV 535
C C T +F PVCG D +Y +P C + G+
Sbjct: 460 CNSACHCSTAQFRPVCGPDGVSYYSPCFAGCKASLGM 496
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,050,069
Number of Sequences: 59808
Number of extensions: 326034
Number of successful extensions: 709
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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