Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B02
         (594 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.9  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.1  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 364 LYYYFRTQRRWSN 402
           +YYYF TQR  +N
Sbjct: 474 VYYYFFTQRTSTN 486


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 364 LYYYFRTQRRWSN 402
           +YYYF TQR  +N
Sbjct: 474 VYYYFFTQRTSTN 486


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 422 EECMRTCPVTPEFN 463
           E+ M   P TPE+N
Sbjct: 74  EDLMNKLPTTPEYN 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,743
Number of Sequences: 438
Number of extensions: 3088
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)