Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B01
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    26   1.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   3.3  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    23   5.8  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 511 LKNSSPDDDGYSADYA-AIFNIILWFGVVFTFTLISIVYALVDMDPGR 371
           L NS+P    Y A  + ++F   L   + FT  L+ +VYAL ++ P R
Sbjct: 482 LVNSNPSAILYRASRSKSLFMSTLL--ISFTLALVPVVYALAEIVPSR 527


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -2

Query: 537 PVLFPTEWN*KTARLTMTVTQRTMPP 460
           P+ FPT W     R T +      PP
Sbjct: 352 PIFFPTYWPHYWNRFTQSTAMHNQPP 377


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 557 CSHTSCPPFCSRPSG 513
           CS T C PFC   SG
Sbjct: 154 CSPTKCVPFCRPFSG 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,299
Number of Sequences: 2352
Number of extensions: 12203
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)