Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B01
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92837-2|CAB07401.1|  324|Caenorhabditis elegans Hypothetical pr...    60   1e-09
Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AL023838-2|CAA19505.1|  452|Caenorhabditis elegans Hypothetical ...    29   3.4  
U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine rece...    28   6.0  
Z81533-13|CAB04336.2|  323|Caenorhabditis elegans Hypothetical p...    27   7.9  

>Z92837-2|CAB07401.1|  324|Caenorhabditis elegans Hypothetical
           protein R03E1.2 protein.
          Length = 324

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 29/51 (56%), Positives = 35/51 (68%)
 Frame = -1

Query: 478 SADYAAIFNIILWFGVVFTFTLISIVYALVDMDPGRDSIIYRMTSTRMKKD 326
           S+DY AIF I L   V+    LI IV  +  +DP +DSIIYRMT+TRMKKD
Sbjct: 274 SSDYPAIFAIFLGLVVILVVALIYIVVGMASIDPEKDSIIYRMTTTRMKKD 324


>Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 475 ADYAAIFNIILWFGVVFTFTLISIVYALVDMDPG-RDSIIYRMTSTRMKK 329
           AD A +FN+++W  VV   TL S +   V +    R++  Y  T  RM K
Sbjct: 191 ADPATMFNVLIWLSVVIV-TLTSTIATTVYLQRNLRENEHYSETVVRMHK 239


>Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 475 ADYAAIFNIILWFGVVFTFTLISIVYALVDMDPG-RDSIIYRMTSTRMKK 329
           AD A +FN+++W  VV   TL S +   V +    R++  Y  T  RM K
Sbjct: 191 ADPATMFNVLIWLSVVIV-TLTSTIATTVYLQRNLRENEHYSETVVRMHK 239


>AL023838-2|CAA19505.1|  452|Caenorhabditis elegans Hypothetical
           protein Y43C5A.2 protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 248 NSTFTILDIELLSNNHKF*SEDLHLIILLHPSASHTVDDGVPAWIHID 391
           N    +LD     N H F   DLH++I    +A+  +DD V   IH+D
Sbjct: 90  NLNLVVLDANA-GNAHSFNGFDLHILISSDQAANSIIDDYV---IHVD 133


>U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine
           receptor, class u protein7 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 14  FFMIPTNYLIHYITLTLFTKLQHYTR 91
           F++IPT Y+++Y   T+F  ++ YTR
Sbjct: 32  FYVIPTIYIVNY---TIFVFMEQYTR 54


>Z81533-13|CAB04336.2|  323|Caenorhabditis elegans Hypothetical
           protein F36G9.6 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 484 GYSADYAAIFNIILWFGVVFTFTLISIV 401
           G++ ++  +FN   WF + F F  + IV
Sbjct: 196 GWTNNFLVMFNTFFWFSICFGFNSVLIV 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,016,689
Number of Sequences: 27780
Number of extensions: 263458
Number of successful extensions: 525
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)