BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_B01 (610 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z92837-2|CAB07401.1| 324|Caenorhabditis elegans Hypothetical pr... 60 1e-09 Z75532-6|CAA99813.2| 330|Caenorhabditis elegans Hypothetical pr... 29 2.0 Z75530-9|CAA99797.2| 330|Caenorhabditis elegans Hypothetical pr... 29 2.0 AL023838-2|CAA19505.1| 452|Caenorhabditis elegans Hypothetical ... 29 3.4 U40797-8|AAL08029.1| 332|Caenorhabditis elegans Serpentine rece... 28 6.0 Z81533-13|CAB04336.2| 323|Caenorhabditis elegans Hypothetical p... 27 7.9 >Z92837-2|CAB07401.1| 324|Caenorhabditis elegans Hypothetical protein R03E1.2 protein. Length = 324 Score = 60.1 bits (139), Expect = 1e-09 Identities = 29/51 (56%), Positives = 35/51 (68%) Frame = -1 Query: 478 SADYAAIFNIILWFGVVFTFTLISIVYALVDMDPGRDSIIYRMTSTRMKKD 326 S+DY AIF I L V+ LI IV + +DP +DSIIYRMT+TRMKKD Sbjct: 274 SSDYPAIFAIFLGLVVILVVALIYIVVGMASIDPEKDSIIYRMTTTRMKKD 324 >Z75532-6|CAA99813.2| 330|Caenorhabditis elegans Hypothetical protein C47E8.2 protein. Length = 330 Score = 29.5 bits (63), Expect = 2.0 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 475 ADYAAIFNIILWFGVVFTFTLISIVYALVDMDPG-RDSIIYRMTSTRMKK 329 AD A +FN+++W VV TL S + V + R++ Y T RM K Sbjct: 191 ADPATMFNVLIWLSVVIV-TLTSTIATTVYLQRNLRENEHYSETVVRMHK 239 >Z75530-9|CAA99797.2| 330|Caenorhabditis elegans Hypothetical protein C47E8.2 protein. Length = 330 Score = 29.5 bits (63), Expect = 2.0 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 475 ADYAAIFNIILWFGVVFTFTLISIVYALVDMDPG-RDSIIYRMTSTRMKK 329 AD A +FN+++W VV TL S + V + R++ Y T RM K Sbjct: 191 ADPATMFNVLIWLSVVIV-TLTSTIATTVYLQRNLRENEHYSETVVRMHK 239 >AL023838-2|CAA19505.1| 452|Caenorhabditis elegans Hypothetical protein Y43C5A.2 protein. Length = 452 Score = 28.7 bits (61), Expect = 3.4 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = +2 Query: 248 NSTFTILDIELLSNNHKF*SEDLHLIILLHPSASHTVDDGVPAWIHID 391 N +LD N H F DLH++I +A+ +DD V IH+D Sbjct: 90 NLNLVVLDANA-GNAHSFNGFDLHILISSDQAANSIIDDYV---IHVD 133 >U40797-8|AAL08029.1| 332|Caenorhabditis elegans Serpentine receptor, class u protein7 protein. Length = 332 Score = 27.9 bits (59), Expect = 6.0 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +2 Query: 14 FFMIPTNYLIHYITLTLFTKLQHYTR 91 F++IPT Y+++Y T+F ++ YTR Sbjct: 32 FYVIPTIYIVNY---TIFVFMEQYTR 54 >Z81533-13|CAB04336.2| 323|Caenorhabditis elegans Hypothetical protein F36G9.6 protein. Length = 323 Score = 27.5 bits (58), Expect = 7.9 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = -1 Query: 484 GYSADYAAIFNIILWFGVVFTFTLISIV 401 G++ ++ +FN WF + F F + IV Sbjct: 196 GWTNNFLVMFNTFFWFSICFGFNSVLIV 223 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,016,689 Number of Sequences: 27780 Number of extensions: 263458 Number of successful extensions: 525 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 511 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 524 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1311096392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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