Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A23
         (434 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001593-1|AAN71348.1|  750|Drosophila melanogaster RE27538p pro...    32   0.39 
AE014296-790|AAF47859.2|  750|Drosophila melanogaster CG15005-PA...    32   0.39 

>BT001593-1|AAN71348.1|  750|Drosophila melanogaster RE27538p
           protein.
          Length = 750

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 114 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 239
           +P P +SQP   PS +Y+  +  P+      P +P   Y+ P
Sbjct: 339 HPPPSYSQPPQHPSSSYDQPAQHPSSSYDQPPKHPSSSYEQP 380



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 114 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 239
           +P   + QP   PS +YE     P+      P +P   YD P
Sbjct: 361 HPSSSYDQPPKHPSSSYEQPPQHPSSSYDQPPQHPSSSYDQP 402



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 114 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 239
           +P   + QP+  PS +Y+     P+      P +P   YD P
Sbjct: 350 HPSSSYDQPAQHPSSSYDQPPKHPSSSYEQPPQHPSSSYDQP 391


>AE014296-790|AAF47859.2|  750|Drosophila melanogaster CG15005-PA
           protein.
          Length = 750

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 114 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 239
           +P P +SQP   PS +Y+  +  P+      P +P   Y+ P
Sbjct: 339 HPPPSYSQPPQHPSSSYDQPAQHPSSSYDQPPKHPSSSYEQP 380



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 114 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 239
           +P   + QP   PS +YE     P+      P +P   YD P
Sbjct: 361 HPSSSYDQPPKHPSSSYEQPPQHPSSSYDQPPQHPSSSYDQP 402



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 114 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 239
           +P   + QP+  PS +Y+     P+      P +P   YD P
Sbjct: 350 HPSSSYDQPAQHPSSSYDQPPKHPSSSYEQPPQHPSSSYDQP 391


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,504,059
Number of Sequences: 53049
Number of extensions: 308420
Number of successful extensions: 805
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)