Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_A20
(425 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g30680.1 68414.m03751 toprim domain-containing protein contai... 30 0.57
At4g34740.1 68417.m04930 amidophosphoribosyltransferase / glutam... 30 0.75
At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutam... 30 0.75
At1g63370.1 68414.m07164 flavin-containing monooxygenase family ... 27 4.0
At1g62620.1 68414.m07065 flavin-containing monooxygenase family ... 27 4.0
At4g38880.1 68417.m05506 amidophosphoribosyltransferase, putativ... 27 7.0
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 27 7.0
At1g30660.1 68414.m03749 toprim domain-containing protein contai... 27 7.0
At5g58140.4 68418.m07274 protein kinase family protein / non pho... 26 9.3
At5g58140.3 68418.m07277 protein kinase family protein / non pho... 26 9.3
At5g58140.2 68418.m07276 protein kinase family protein / non pho... 26 9.3
At5g58140.1 68418.m07275 protein kinase family protein / non pho... 26 9.3
At3g62010.1 68416.m06964 expressed protein 26 9.3
At1g62560.1 68414.m07058 flavin-containing monooxygenase family ... 26 9.3
At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing... 26 9.3
>At1g30680.1 68414.m03751 toprim domain-containing protein contains
Pfam profile: PF01751 toprim domain
Length = 709
Score = 30.3 bits (65), Expect = 0.57
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 69 QGIPIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCF 209
QG+ CP G+HS L CP + ++ P G CF
Sbjct: 119 QGVDAENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSATWNCF 165
>At4g34740.1 68417.m04930 amidophosphoribosyltransferase / glutamine
phosphoribosylpyrophosphate amidotransferase /
phosphoribosyldiphosphate 5-amidotransferase nearly
identical to amidophosphoribosyltransferase [Arabidopsis
thaliana] GI:469195; identical to cDNA
amidophosphoribosyltransferase, partial cds GI:469194
Length = 561
Score = 29.9 bits (64), Expect = 0.75
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 394 FGHYFFNLPNALIFERKILKNRKNF 320
F H +F+LPN+++F R + ++R F
Sbjct: 325 FEHIYFSLPNSIVFGRSVYESRHVF 349
>At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutamine
phosphoribosylpyrophosphate amidotransferase /
phosphoribosyldiphosphate 5-amidotransferase identical
to amidophosphoribosyltransferase [Arabidopsis thaliana]
GI:469193; identical to cDNA
amidophosphoribosyltransferase GI:469192
Length = 566
Score = 29.9 bits (64), Expect = 0.75
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 394 FGHYFFNLPNALIFERKILKNRKNF 320
F H +F+LPN+++F R + ++R F
Sbjct: 329 FEHIYFSLPNSIVFGRSVYESRHVF 353
>At1g63370.1 68414.m07164 flavin-containing monooxygenase family
protein / FMO family protein similar to FMO5 from Cavia
porcellus [SP|P49109]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 450
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 169 WTHHQGCATYRSASATYRTFETLKPESASNCQNVKYNF 282
WTH + + S Y+ +T+ + +C KY+F
Sbjct: 256 WTHSMIESVHEDGSVVYQNGKTISVDIIMHCTGYKYHF 293
>At1g62620.1 68414.m07065 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 3 (FMO3) from Rattus
norvegicus [GI:12006730], FMO1 from Canis familiaris]
[GI:15420722], FMO1 from Homo sapiens [SP|Q01740];
contains Pfam profile: PF00743 Flavin-binding
monooxygenase-like
Length = 450
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 169 WTHHQGCATYRSASATYRTFETLKPESASNCQNVKYNF 282
WTH + + S Y+ +T+ + +C KY+F
Sbjct: 256 WTHSMIESVHEDGSVVYQNGKTISVDIIMHCTGYKYHF 293
>At4g38880.1 68417.m05506 amidophosphoribosyltransferase, putative /
glutamine phosphoribosylpyrophosphate amidotransferase,
putative / phosphoribosyldiphosphate 5-amidotransferase,
putative similar to amidophosphoribosyltransferase
[Arabidopsis thaliana] GI:469195; contains Pfam profiles
PF00156: Phosphoribosyl transferase domain, PF00310:
Glutamine amidotransferases class-II
Length = 532
Score = 26.6 bits (56), Expect = 7.0
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 394 FGHYFFNLPNALIFERKILKNRKNF 320
F H +F+ PN+++F R + + R+ +
Sbjct: 315 FEHGYFSQPNSIVFGRSVYETRRMY 339
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 26.6 bits (56), Expect = 7.0
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 159 VHEMDPPSGLCDVPQ 203
+H++D P+G+CD PQ
Sbjct: 749 LHKVDTPAGICDGPQ 763
>At1g30660.1 68414.m03749 toprim domain-containing protein contains
Pfam profile PF01751: Toprim domain
Length = 321
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 69 QGIPIRKCPAGEHSVLYCPQ 128
QGI + CP G S L CP+
Sbjct: 45 QGIDAQNCPPGVRSCLICPK 64
>At5g58140.4 68418.m07274 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 689
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 11 KNEVSRVPNCVGYGSHHLRSRNSYKK--MPGW*TLSV 115
KNEV+++ +CV G + +YKK P W L+V
Sbjct: 180 KNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTV 216
>At5g58140.3 68418.m07277 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 11 KNEVSRVPNCVGYGSHHLRSRNSYKK--MPGW*TLSV 115
KNEV+++ +CV G + +YKK P W L+V
Sbjct: 180 KNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTV 216
>At5g58140.2 68418.m07276 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 11 KNEVSRVPNCVGYGSHHLRSRNSYKK--MPGW*TLSV 115
KNEV+++ +CV G + +YKK P W L+V
Sbjct: 180 KNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTV 216
>At5g58140.1 68418.m07275 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 11 KNEVSRVPNCVGYGSHHLRSRNSYKK--MPGW*TLSV 115
KNEV+++ +CV G + +YKK P W L+V
Sbjct: 180 KNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTV 216
>At3g62010.1 68416.m06964 expressed protein
Length = 1254
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 132 AEPSCDNPTVHEMDPPSGLCD 194
A P+ ++ T+ E D PSG CD
Sbjct: 1115 ATPTTNSSTLEEDDSPSGACD 1135
>At1g62560.1 68414.m07058 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase GB:AAA21178 GI:349534
SP|P32417 from [Oryctolagus cuniculus]; contains Pfam
profile PF00743 Flavin-binding monooxygenase-like
Length = 462
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +1
Query: 169 WTHHQGCATYRSASATYRTFETLKPESASNCQNVKYNF 282
W H + T+ S ++ + + +S C KYNF
Sbjct: 254 WMHSEIDTTHEDGSIVFKNGKVIFADSIVYCTGYKYNF 291
>At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427, gpStaf50
[Homo sapiens] GI:899300; contains Pfam profiles
PF03105: SPX domain, PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 335
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 304 VKIFFKYRNYI*HFDSLMHFPVLRFRTFGTLQKHCGTSHSPDGGSISWTVGLSHDGSACC 125
+K KY Y+ + P + F+ + K C +H P IS+T ++H+ S C
Sbjct: 1 MKFCKKYEEYMQGQKEKKNLPGVGFKKLKKILKRCRRNHVP--SRISFTDAINHNCSREC 58
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,376,467
Number of Sequences: 28952
Number of extensions: 167409
Number of successful extensions: 416
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 665183504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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