Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A19
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.5  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 59  AAGKVNLFHNDXHDITAKAFATRNMPDI 142
           AA K+N FH    D  +  F   ++PD+
Sbjct: 235 AASKLNSFHWHITDSHSFPFTAESLPDL 262


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 59  AAGKVNLFHNDXHDITAKAFATRNMPDIA 145
           AA K+N+FH    D  +    ++ +P +A
Sbjct: 265 AANKLNVFHWHLTDSQSFPLVSQRVPQLA 293



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 478 HLVISFNAKIIQYISKFRYIE 416
           H  ++FN  II  +    Y+E
Sbjct: 129 HSFVAFNTNIISLVQNKDYVE 149


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 187  IVYSATDSVEVGYISDIWHISGGESLRCDVVVIVVE 80
            IV SA   +EV   S   H+S      C ++  V+E
Sbjct: 1492 IVPSAEKFIEVSSNSITLHLSAWSDGGCPMLYFVIE 1527


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 475 LVISFNAKIIQYISKFRYIE 416
           + +S+N  + Q +S F Y +
Sbjct: 191 MFVSYNIYVCQTVSNFEYFQ 210


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 475 LVISFNAKIIQYISKFRYIE 416
           + +S+N  + Q +S F Y +
Sbjct: 117 MFVSYNIYVCQTVSNFEYFQ 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,032
Number of Sequences: 336
Number of extensions: 2337
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)