Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A17
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -1

Query: 375 IFFFKTSRIVPCCMLVVIFMH 313
           I++F    ++ CC  ++  MH
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMH 278



 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -3

Query: 325 HFYALLCLNSLPKL*KLNTPSPFSRKCQLTAPLV 224
           HFY    L  L     LN   PF  +     P++
Sbjct: 311 HFYCAFSLYPLKSTFYLNVVRPFPERSMGITPMI 344


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 263 ALLAKMPTDCPARYCPVMLRWARHE*TQPAN 171
           +L++  P D  ARY P  L   R     P N
Sbjct: 11  SLISNTPKDMNARYLPPSLSDTRPMLPYPQN 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,036
Number of Sequences: 336
Number of extensions: 1760
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)