Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_A15
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40333| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 2e-39
SB_59505| Best HMM Match : Iso_dh (HMM E-Value=1.1) 81 1e-15
SB_40558| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.085
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_25021| Best HMM Match : TP2 (HMM E-Value=2.8) 30 1.4
SB_26442| Best HMM Match : Iso_dh (HMM E-Value=3.6e-37) 30 1.8
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_20744| Best HMM Match : CH (HMM E-Value=0.92) 29 4.2
SB_31707| Best HMM Match : Extensin_2 (HMM E-Value=0.19) 28 7.4
SB_15457| Best HMM Match : CPSase_L_D2 (HMM E-Value=0) 27 9.8
SB_29267| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_40333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 159 bits (385), Expect = 2e-39
Identities = 73/165 (44%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Frame = +3
Query: 6 VHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYGD 185
VHKANIM+ +DGLFL C D+A Y I FE +D C+ +V P +FDV+V+PNLYG
Sbjct: 172 VHKANIMKKADGLFLNTCADVAKLYPKIHFEGMIVDNTCMQLVAKPQQFDVMVLPNLYGS 231
Query: 186 IMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLRH 362
I+ ++ +GLVGG GL P +IG + A+FE T +AG+++ANPTA+LL+ + +L H
Sbjct: 232 IVDNVGAGLVGGAGLVPGVSIGSHFAIFEPGARHTYAQMAGRNVANPTAMLLAGVDLLHH 291
Query: 363 LQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
L L + A ++Q A + +++GK LT D+GG+ +++ A+I L
Sbjct: 292 LNLGQFAVQIQKAVEKTIKDGKVLTMDMGGSASTTDFMQAVIGNL 336
>SB_59505| Best HMM Match : Iso_dh (HMM E-Value=1.1)
Length = 145
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 5/66 (7%)
Frame = +3
Query: 249 GKNGALF-----ESVHGTAPDIAGKDMANPTALLLSAIMMLRHLQLNEHADRVQNACYEV 413
G+N LF + VHGTAPDIA +D ANPTALLLSA+MMLRH++LN HAD V+ A +
Sbjct: 49 GQNFTLFRYCSIDQVHGTAPDIASQDKANPTALLLSAVMMLRHMKLNSHADAVEKAVLKT 108
Query: 414 LREGKS 431
+ EGK+
Sbjct: 109 ISEGKT 114
>SB_40558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 34.3 bits (75), Expect = 0.085
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 285 TAPDIAGKDMANPTALLLSAIMMLRHLQLNEHADRVQ 395
T DI GKD++NP ++L ++ +ML HL +++ Q
Sbjct: 18 TGLDIQGKDISNPISMLFASTLMLEHLDACNPSEQFQ 54
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 310 SFPAISGAVP*TDSNRAPFLPMLPEGVSPNPPTRPEH 200
S+P I+ + P T + P P P S PPT+P H
Sbjct: 213 SYPPIAASYPPTAPSYNPTAPSYPPTPSSYPPTQPSH 249
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +3
Query: 180 GDIMSDMCSGLVGGLGLTPSGNIGKNGALFESVHGTAP 293
GD M D G GG G G GK G +FESV G P
Sbjct: 2243 GDCM-DGDPGQAGGNGTRHGGRGGKGGVVFESVGGINP 2279
>SB_25021| Best HMM Match : TP2 (HMM E-Value=2.8)
Length = 643
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 219 GLG-LTPSGNIGKNGALFESVHGTAPDIAGK 308
G+G ++PSG++ NG++ ES G P + GK
Sbjct: 581 GVGSVSPSGSVSSNGSIPESGEGVKPKVNGK 611
>SB_26442| Best HMM Match : Iso_dh (HMM E-Value=3.6e-37)
Length = 296
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 60 RDLATKY--SDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYGDIMSDMCSGLVGGLGLT 233
R+ +K+ S+I +E R +D + ++ F + N GD+ SD + G LG+
Sbjct: 174 REYKSKFEESNIWYEHRLIDDMVAFALKTEGGF-IWACKNYDGDVQSDSVAQGFGSLGMM 232
Query: 234 PSGNIGKNGALFES--VHGT 287
S + +G ES HGT
Sbjct: 233 TSVLVCPDGKTVESEAAHGT 252
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 274 DSNRAPFLPMLPEGVSPNPPTRPEHMSDMMS 182
D N P + P+G PNPP+R E SD+++
Sbjct: 803 DLNVPPAVKPKPKGGRPNPPSRGESGSDLLA 833
>SB_20744| Best HMM Match : CH (HMM E-Value=0.92)
Length = 1103
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 297 IAGKDMANPTALLLSAIMMLRHLQLNEHADRVQNACYEVLREGKS 431
+ GKD AN TAL LSA R R+ ++ E+++ G+S
Sbjct: 337 VKGKDAANGTALSLSATGRYRSSGHEADTSRLSDSTNELIKLGES 381
>SB_31707| Best HMM Match : Extensin_2 (HMM E-Value=0.19)
Length = 309
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 259 PFLPMLPEGVSPNPPTRPEH 200
P+ P+ PE P PP RPE+
Sbjct: 184 PYPPLRPEYAHPYPPRRPEY 203
>SB_15457| Best HMM Match : CPSase_L_D2 (HMM E-Value=0)
Length = 295
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 78 YSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYGDIM 191
Y DIK Y + ++++ P +V VM + YGD++
Sbjct: 101 YDDIKMRISYCNVREYSILEKPRHIEVQVMGDNYGDVV 138
>SB_29267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 220 PPTRPEHMSDMMSPYKLGITKTSNLEGSCTMFRQTVSK 107
PP RPE D YK + K NL C + +S+
Sbjct: 72 PPGRPEEGEDDSGTYKTYVVKAGNLLELCGIIITCISR 109
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,174,952
Number of Sequences: 59808
Number of extensions: 502904
Number of successful extensions: 2731
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2726
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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