Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_A15
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U07681-1|AAA85639.1| 366|Homo sapiens NAD(H)-specific isocitrat... 265 8e-71
BC021967-1|AAH21967.1| 366|Homo sapiens isocitrate dehydrogenas... 265 8e-71
AL442090-1|CAC09449.1| 288|Homo sapiens hypothetical protein pr... 265 8e-71
AK222973-1|BAD96693.1| 366|Homo sapiens isocitrate dehydrogenas... 265 8e-71
AL049712-2|CAC01443.1| 383|Homo sapiens isocitrate dehydrogenas... 169 7e-42
AF023265-1|AAD09339.1| 383|Homo sapiens NAD+-specific isocitrat... 169 7e-42
U49283-1|AAB94295.1| 385|Homo sapiens NAD+-specific isocitrate ... 161 2e-39
BC001960-1|AAH01960.1| 385|Homo sapiens isocitrate dehydrogenas... 161 2e-39
AL050094-1|CAB43266.1| 259|Homo sapiens hypothetical protein pr... 161 2e-39
AL049712-1|CAC01442.2| 385|Homo sapiens isocitrate dehydrogenas... 161 2e-39
AF023266-1|AAD09340.1| 387|Homo sapiens NAD+-specific isocitrat... 161 2e-39
AK001905-1|BAA91971.1| 233|Homo sapiens protein ( Homo sapiens ... 161 3e-39
Z68907-1|CAA93143.1| 393|Homo sapiens NAD (H)-specific isocitra... 157 4e-38
Z68129-1|CAA92214.1| 393|Homo sapiens NAD(H)-specific isocitrat... 157 4e-38
U40272-1|AAD09357.1| 393|Homo sapiens NAD+-specific isocitrate ... 157 4e-38
BC000933-1|AAH00933.1| 393|Homo sapiens isocitrate dehydrogenas... 157 4e-38
BC001902-1|AAH01902.1| 393|Homo sapiens isocitrate dehydrogenas... 154 2e-37
U69269-1|AAB70116.1| 210|Homo sapiens NAD (H)-specific isocitra... 146 4e-35
U69268-1|AAB70115.1| 296|Homo sapiens NAD (H)-specific isocitra... 146 6e-35
AF046929-1|AAF20164.1| 156|Homo sapiens NAD+-specific isocitrat... 134 2e-31
AB209206-1|BAD92443.1| 174|Homo sapiens isocitrate dehydrogenas... 130 3e-30
X69433-1|CAA49208.1| 452|Homo sapiens isocitrate dehydrogenase... 34 0.49
U52144-1|AAC50455.1| 419|Homo sapiens isocitrate dehydrogenase ... 34 0.49
BC071828-1|AAH71828.1| 452|Homo sapiens isocitrate dehydrogenas... 34 0.49
BC009244-1|AAH09244.1| 452|Homo sapiens isocitrate dehydrogenas... 34 0.49
AK222916-1|BAD96636.1| 452|Homo sapiens isocitrate dehydrogenas... 34 0.49
AK093338-1|BAC04136.1| 355|Homo sapiens protein ( Homo sapiens ... 33 0.86
BC019839-1|AAH19839.1| 297|Homo sapiens LOC150356 protein protein. 31 3.5
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 31 3.5
BC088376-1|AAH88376.1| 158|Homo sapiens ankyrin repeat domain 3... 30 6.1
AY296056-1|AAP50252.1| 158|Homo sapiens low density lipoprotein... 30 6.1
BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B associ... 30 8.0
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 30 8.0
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 30 8.0
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 30 8.0
AF190637-1|AAG17141.1| 1241|Homo sapiens nephrin protein. 30 8.0
AF035835-1|AAC39687.1| 1241|Homo sapiens nephrin protein. 30 8.0
>U07681-1|AAA85639.1| 366|Homo sapiens NAD(H)-specific isocitrate
dehydrogenase alpha subunit precursor protein.
Length = 366
Score = 265 bits (650), Expect = 8e-71
Identities = 121/166 (72%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIMRMSDGLFL+ CR++A DIKF E YLDTVCLNMVQDPS+FDVLVMPNLYG
Sbjct: 197 AVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYG 256
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNG-ALFESVHGTAPDIAGKDMANPTALLLSAIMMLR 359
DI+SD+C+GL+GGLG+TPSGNIG NG A+FESVHGTAPDIAGKDMANPTALLLSA+MMLR
Sbjct: 257 DILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLR 316
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
H+ L +HA R++ AC+ +++GKSLT DLGG KCS++T I ++
Sbjct: 317 HMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRV 362
>BC021967-1|AAH21967.1| 366|Homo sapiens isocitrate dehydrogenase 3
(NAD+) alpha protein.
Length = 366
Score = 265 bits (650), Expect = 8e-71
Identities = 121/166 (72%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIMRMSDGLFL+ CR++A DIKF E YLDTVCLNMVQDPS+FDVLVMPNLYG
Sbjct: 197 AVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYG 256
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNG-ALFESVHGTAPDIAGKDMANPTALLLSAIMMLR 359
DI+SD+C+GL+GGLG+TPSGNIG NG A+FESVHGTAPDIAGKDMANPTALLLSA+MMLR
Sbjct: 257 DILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLR 316
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
H+ L +HA R++ AC+ +++GKSLT DLGG KCS++T I ++
Sbjct: 317 HMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRV 362
>AL442090-1|CAC09449.1| 288|Homo sapiens hypothetical protein
protein.
Length = 288
Score = 265 bits (650), Expect = 8e-71
Identities = 121/166 (72%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIMRMSDGLFL+ CR++A DIKF E YLDTVCLNMVQDPS+FDVLVMPNLYG
Sbjct: 119 AVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYG 178
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNG-ALFESVHGTAPDIAGKDMANPTALLLSAIMMLR 359
DI+SD+C+GL+GGLG+TPSGNIG NG A+FESVHGTAPDIAGKDMANPTALLLSA+MMLR
Sbjct: 179 DILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLR 238
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
H+ L +HA R++ AC+ +++GKSLT DLGG KCS++T I ++
Sbjct: 239 HMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRV 284
>AK222973-1|BAD96693.1| 366|Homo sapiens isocitrate dehydrogenase 3
(NAD+) alpha precursor variant protein.
Length = 366
Score = 265 bits (650), Expect = 8e-71
Identities = 121/166 (72%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIMRMSDGLFL+ CR++A DIKF E YLDTVCLNMVQDPS+FDVLVMPNLYG
Sbjct: 197 AVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYG 256
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNG-ALFESVHGTAPDIAGKDMANPTALLLSAIMMLR 359
DI+SD+C+GL+GGLG+TPSGNIG NG A+FESVHGTAPDIAGKDMANPTALLLSA+MMLR
Sbjct: 257 DILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLR 316
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
H+ L +HA R++ AC+ +++GKSLT DLGG KCS++T I ++
Sbjct: 317 HMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRV 362
>AL049712-2|CAC01443.1| 383|Homo sapiens isocitrate dehydrogenase 3
(NAD+) beta protein.
Length = 383
Score = 169 bits (411), Expect = 7e-42
Identities = 78/166 (46%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG
Sbjct: 215 AVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYG 274
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I+ ++ +GLVGG G+ P + A+FE+ G+++ANPTA+LLSA MLR
Sbjct: 275 NIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLR 334
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
HL L H+ + +A +V++ GK T D+GG C ++T A+I+ L
Sbjct: 335 HLNLEYHSSMIADAVKKVIKVGKVRTSDMGGYATCHDFTEAVIAAL 380
>AF023265-1|AAD09339.1| 383|Homo sapiens NAD+-specific isocitrate
dehydrogenase beta subunit isoform A protein.
Length = 383
Score = 169 bits (411), Expect = 7e-42
Identities = 78/166 (46%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG
Sbjct: 215 AVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYG 274
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I+ ++ +GLVGG G+ P + A+FE+ G+++ANPTA+LLSA MLR
Sbjct: 275 NIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLR 334
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
HL L H+ + +A +V++ GK T D+GG C ++T A+I+ L
Sbjct: 335 HLNLEYHSSMIADAVKKVIKVGKVRTSDMGGYATCHDFTEAVIAAL 380
>U49283-1|AAB94295.1| 385|Homo sapiens NAD+-specific isocitrate
dehydrogenase beta precursor protein.
Length = 385
Score = 161 bits (391), Expect = 2e-39
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG
Sbjct: 215 AVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYG 274
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I+ ++ +GLVGG G+ P + A+FE+ G+++ANPTA+LLSA MLR
Sbjct: 275 NIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLR 334
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
HL L H+ + +A +V++ GK T D+GG +++ ++I L
Sbjct: 335 HLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
>BC001960-1|AAH01960.1| 385|Homo sapiens isocitrate dehydrogenase 3
(NAD+) beta protein.
Length = 385
Score = 161 bits (391), Expect = 2e-39
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG
Sbjct: 215 AVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYG 274
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I+ ++ +GLVGG G+ P + A+FE+ G+++ANPTA+LLSA MLR
Sbjct: 275 NIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLR 334
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
HL L H+ + +A +V++ GK T D+GG +++ ++I L
Sbjct: 335 HLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
>AL050094-1|CAB43266.1| 259|Homo sapiens hypothetical protein
protein.
Length = 259
Score = 161 bits (391), Expect = 2e-39
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG
Sbjct: 89 AVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYG 148
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I+ ++ +GLVGG G+ P + A+FE+ G+++ANPTA+LLSA MLR
Sbjct: 149 NIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLR 208
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
HL L H+ + +A +V++ GK T D+GG +++ ++I L
Sbjct: 209 HLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 254
>AL049712-1|CAC01442.2| 385|Homo sapiens isocitrate dehydrogenase 3
(NAD+) beta protein.
Length = 385
Score = 161 bits (391), Expect = 2e-39
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG
Sbjct: 215 AVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYG 274
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I+ ++ +GLVGG G+ P + A+FE+ G+++ANPTA+LLSA MLR
Sbjct: 275 NIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLR 334
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
HL L H+ + +A +V++ GK T D+GG +++ ++I L
Sbjct: 335 HLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
>AF023266-1|AAD09340.1| 387|Homo sapiens NAD+-specific isocitrate
dehydrogenase beta subunit isoform B protein.
Length = 387
Score = 161 bits (391), Expect = 2e-39
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG
Sbjct: 215 AVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYG 274
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I+ ++ +GLVGG G+ P + A+FE+ G+++ANPTA+LLSA MLR
Sbjct: 275 NIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLR 334
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
HL L H+ + +A +V++ GK T D+GG +++ ++I L
Sbjct: 335 HLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
>AK001905-1|BAA91971.1| 233|Homo sapiens protein ( Homo sapiens
cDNA FLJ11043 fis, clone PLACE1004437, highly similar to
Human NAD+-specific isocitrate dehydrogenase beta
subunit ).
Length = 233
Score = 161 bits (390), Expect = 3e-39
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG
Sbjct: 63 AVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIVDNCCMQLVQNPYQFDVLVMPNLYG 122
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I+ ++ +GLVGG G+ P + A+FE+ G+++ANPTA+LLSA MLR
Sbjct: 123 NIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLR 182
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
HL L H+ + +A +V++ GK T D+GG +++ ++I L
Sbjct: 183 HLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 228
>Z68907-1|CAA93143.1| 393|Homo sapiens NAD (H)-specific isocitrate
dehydrogenase gamma subunit precursor protein.
Length = 393
Score = 157 bits (380), Expect = 4e-38
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CCR++A +Y I FE +D + +V P +FDV+VMPNLYG
Sbjct: 218 AVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYG 277
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I++++C+GLVGG GL N G A+FE + T IA K++ANPTA LL++ MML
Sbjct: 278 NIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLD 337
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAII 488
HL+L+ +A ++ A + T D+GG G SE +I
Sbjct: 338 HLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVI 380
>Z68129-1|CAA92214.1| 393|Homo sapiens NAD(H)-specific isocitrate
dehydrogenase gamma-subunit precursor protein.
Length = 393
Score = 157 bits (380), Expect = 4e-38
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CCR++A +Y I FE +D + +V P +FDV+VMPNLYG
Sbjct: 218 AVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYG 277
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I++++C+GLVGG GL N G A+FE + T IA K++ANPTA LL++ MML
Sbjct: 278 NIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLD 337
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAII 488
HL+L+ +A ++ A + T D+GG G SE +I
Sbjct: 338 HLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVI 380
>U40272-1|AAD09357.1| 393|Homo sapiens NAD+-specific isocitrate
dehydrogenase gamma subunit precursor protein.
Length = 393
Score = 157 bits (380), Expect = 4e-38
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CCR++A +Y I FE +D + +V P +FDV+VMPNLYG
Sbjct: 218 AVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYG 277
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I++++C+GLVGG GL N G A+FE + T IA K++ANPTA LL++ MML
Sbjct: 278 NIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLD 337
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAII 488
HL+L+ +A ++ A + T D+GG G SE +I
Sbjct: 338 HLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVI 380
>BC000933-1|AAH00933.1| 393|Homo sapiens isocitrate dehydrogenase 3
(NAD+) gamma protein.
Length = 393
Score = 157 bits (380), Expect = 4e-38
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CCR++A +Y I FE +D + +V P +FDV+VMPNLYG
Sbjct: 218 AVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYG 277
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I++++C+GLVGG GL N G A+FE + T IA K++ANPTA LL++ MML
Sbjct: 278 NIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLD 337
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAII 488
HL+L+ +A ++ A + T D+GG G SE +I
Sbjct: 338 HLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVI 380
>BC001902-1|AAH01902.1| 393|Homo sapiens isocitrate dehydrogenase 3
(NAD+) gamma protein.
Length = 393
Score = 154 bits (374), Expect = 2e-37
Identities = 74/163 (45%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CCR++A +Y I FE +D + +V P + DV+VMPNLYG
Sbjct: 218 AVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQLDVMVMPNLYG 277
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I++++C+GLVGG GL N G A+FE + T IA K++ANPTA LL++ MML
Sbjct: 278 NIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLD 337
Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAII 488
HL+L+ +A ++ A + T D+GG G SE +I
Sbjct: 338 HLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVI 380
>U69269-1|AAB70116.1| 210|Homo sapiens NAD (H)-specific isocitrate
dehydrogenase gamma subunit protein.
Length = 210
Score = 146 bits (355), Expect = 4e-35
Identities = 77/175 (44%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CCR++A +Y I FE +D + +V P +FDV+VMPNLYG
Sbjct: 23 AVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYG 82
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I++++C+GLVGG GL N G A+FE + T IA K++ANPTA LL++ MML
Sbjct: 83 NIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLD 142
Query: 360 HLQLNEHADRVQNA------------CYEVLREGKSLTGDLGGTGKCSEYTNAII 488
HL+L+ +A ++ A C E + T D+GG G SE +I
Sbjct: 143 HLKLHSYATSIRKAVLASMDNENGLVCAEPACVLQMHTPDIGGQGTTSEAIQDVI 197
>U69268-1|AAB70115.1| 296|Homo sapiens NAD (H)-specific isocitrate
dehydrogenase gamma subunit protein.
Length = 296
Score = 146 bits (354), Expect = 6e-35
Identities = 67/134 (50%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
AVHKANIM++ DGLFL+CCR++A +Y I FE +D + +V P +FDV+VMPNLYG
Sbjct: 134 AVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYG 193
Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLR 359
+I++++C+GLVGG GL N G A+FE + T IA K++ANPTA LL++ MML
Sbjct: 194 NIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLD 253
Query: 360 HLQLNEHADRVQNA 401
HL+L+ +A ++ A
Sbjct: 254 HLKLHSYATSIRKA 267
>AF046929-1|AAF20164.1| 156|Homo sapiens NAD+-specific isocitrate
dehydrogenase b subunit protein.
Length = 156
Score = 134 bits (325), Expect = 2e-31
Identities = 63/151 (41%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Frame = +3
Query: 48 LRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYGDIMSDMCSGLVGGLG 227
L+CC ++A Y IKFE +D C+ +VQ+P +FDVLVMPNLYG+I+ ++ +GLVGG G
Sbjct: 1 LQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAG 60
Query: 228 LTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLRHLQLNEHADRVQNAC 404
+ P + A+FE+ G+++ANPTA+LLSA MLRHL L H+ + +A
Sbjct: 61 VVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIADAV 120
Query: 405 YEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
+V++ GK T D+GG +++ ++I L
Sbjct: 121 KKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 151
>AB209206-1|BAD92443.1| 174|Homo sapiens isocitrate dehydrogenase 3
(NAD+) gamma isoform b precursor variant protein.
Length = 174
Score = 130 bits (315), Expect = 3e-30
Identities = 59/129 (45%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Frame = +3
Query: 18 NIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYGDIMSD 197
++ ++ DGLFL+CCR++A +Y I FE +D + +V P +FDV+VMPNLYG+I+++
Sbjct: 17 SMRKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNN 76
Query: 198 MCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLRHLQLN 374
+C+GLVGG GL N G A+FE + T IA K++ANPTA LL++ MML HL+L+
Sbjct: 77 VCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLH 136
Query: 375 EHADRVQNA 401
+A ++ A
Sbjct: 137 SYATSIRKA 145
>X69433-1|CAA49208.1| 452|Homo sapiens isocitrate dehydrogenase
(NADP+) protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.49
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Frame = +3
Query: 12 KANIMRMSDGLFLRCCRDLATKY-------SDIKFEERYLDTVCLNMVQDPSKFDVLVMP 170
K I++ DG F +++ K+ + I +E R +D + +++ F V
Sbjct: 251 KNTILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLIDDMVAQVLKSSGGF-VWACK 309
Query: 171 NLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALF--ESVHGTA-----PDIAGKDMA-NPT 326
N GD+ SD+ + G LGL S + +G E+ HGT G+ + NP
Sbjct: 310 NYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPI 369
Query: 327 ALLLSAIMMLRH-------LQLNEHADRVQNACYEVLREGKSLTGDLGG 452
A + + L H L A ++ C E + G ++T DL G
Sbjct: 370 ASIFAWTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESG-AMTKDLAG 417
>U52144-1|AAC50455.1| 419|Homo sapiens isocitrate dehydrogenase
protein.
Length = 419
Score = 33.9 bits (74), Expect = 0.49
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Frame = +3
Query: 12 KANIMRMSDGLFLRCCRDLATKY-------SDIKFEERYLDTVCLNMVQDPSKFDVLVMP 170
K I++ DG F +++ K+ + I +E R +D + +++ F V
Sbjct: 218 KNTILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLIDDMVAQVLKSSGGF-VWACK 276
Query: 171 NLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALF--ESVHGTA-----PDIAGKDMA-NPT 326
N GD+ SD+ + G LGL S + +G E+ HGT G+ + NP
Sbjct: 277 NYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPI 336
Query: 327 ALLLSAIMMLRH-------LQLNEHADRVQNACYEVLREGKSLTGDLGG 452
A + + L H L A ++ C E + G ++T DL G
Sbjct: 337 ASIFAWTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESG-AMTKDLAG 384
>BC071828-1|AAH71828.1| 452|Homo sapiens isocitrate dehydrogenase 2
(NADP+), mitochondrial protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.49
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Frame = +3
Query: 12 KANIMRMSDGLFLRCCRDLATKY-------SDIKFEERYLDTVCLNMVQDPSKFDVLVMP 170
K I++ DG F +++ K+ + I +E R +D + +++ F V
Sbjct: 251 KNTILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLIDDMVAQVLKSSGGF-VWACK 309
Query: 171 NLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALF--ESVHGTA-----PDIAGKDMA-NPT 326
N GD+ SD+ + G LGL S + +G E+ HGT G+ + NP
Sbjct: 310 NYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPI 369
Query: 327 ALLLSAIMMLRH-------LQLNEHADRVQNACYEVLREGKSLTGDLGG 452
A + + L H L A ++ C E + G ++T DL G
Sbjct: 370 ASIFAWTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESG-AMTKDLAG 417
>BC009244-1|AAH09244.1| 452|Homo sapiens isocitrate dehydrogenase 2
(NADP+), mitochondrial protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.49
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Frame = +3
Query: 12 KANIMRMSDGLFLRCCRDLATKY-------SDIKFEERYLDTVCLNMVQDPSKFDVLVMP 170
K I++ DG F +++ K+ + I +E R +D + +++ F V
Sbjct: 251 KNTILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLIDDMVAQVLKSSGGF-VWACK 309
Query: 171 NLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALF--ESVHGTA-----PDIAGKDMA-NPT 326
N GD+ SD+ + G LGL S + +G E+ HGT G+ + NP
Sbjct: 310 NYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPI 369
Query: 327 ALLLSAIMMLRH-------LQLNEHADRVQNACYEVLREGKSLTGDLGG 452
A + + L H L A ++ C E + G ++T DL G
Sbjct: 370 ASIFAWTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESG-AMTKDLAG 417
>AK222916-1|BAD96636.1| 452|Homo sapiens isocitrate dehydrogenase 2
(NADP+), mitochondrial precursor variant protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.49
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 22/169 (13%)
Frame = +3
Query: 12 KANIMRMSDGLFLRCCRDLATKYSDIKF-------EERYLDTVCLNMVQDPSKFDVLVMP 170
K I++ DG F +++ K+ + F E R +D + +++ F V
Sbjct: 251 KNTILKAYDGRFKDIFQEIFDKHYETDFDKNKIWYEHRLIDDMVAQVLKSSGGF-VWACK 309
Query: 171 NLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALF--ESVHGTA-----PDIAGKDMA-NPT 326
N GD+ SD+ + G LGL S + +G E+ HGT G+ + NP
Sbjct: 310 NYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPI 369
Query: 327 ALLLSAIMMLRH-------LQLNEHADRVQNACYEVLREGKSLTGDLGG 452
A + + L H L A ++ C E + G ++T DL G
Sbjct: 370 ASIFAWTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESG-AMTKDLAG 417
>AK093338-1|BAC04136.1| 355|Homo sapiens protein ( Homo sapiens
cDNA FLJ36019 fis, clone TESTI2016421, highly similar to
PROTEIN KINASE C-BINDING PROTEIN NELL1. ).
Length = 355
Score = 33.1 bits (72), Expect = 0.86
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 3 AVHKANIMRMSDGLFLRCC 59
AVHK NI ++ DG FL+CC
Sbjct: 85 AVHKVNITKLGDGPFLQCC 103
>BC019839-1|AAH19839.1| 297|Homo sapiens LOC150356 protein protein.
Length = 297
Score = 31.1 bits (67), Expect = 3.5
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 255 SCLCYRRASAPTPRLDLSTCPT*CHRTSWASPKRRTWRDPAPCSG 121
SC C AP P ++ P C T W + TW + PC+G
Sbjct: 255 SCRCQGLPCAPCP----ASSPCTCRTTLWTAWHLGTWGEHGPCAG 295
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 3.5
Identities = 28/100 (28%), Positives = 42/100 (42%)
Frame = +1
Query: 1 PPSTRLISCGCQTVSS*GVVAISQPNTRTSSSKSATWTPFA*TWCRIPPSSTFW*CPTCT 180
P S+ + T+S+ IS P T T+SS + + T T P+S+ P +
Sbjct: 386 PTSSTTSAPTSSTISARTTSIISAPTTSTTSSPTTSTTSATTTSTTSAPTSSTTSTPQTS 445
Query: 181 VTSCRTCAQV*SGGWG*RPPVT*ARTEPYSSLFTAQLPIS 300
TS T + S G PVT T S T+ + +S
Sbjct: 446 KTSAATSSTTSSSGTT-PSPVTTTSTASVSKTSTSHVSVS 484
>BC088376-1|AAH88376.1| 158|Homo sapiens ankyrin repeat domain 37
protein.
Length = 158
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 285 TAPDIAGKDMANPTALLLSAIMMLRHLQLNEHADRVQNACYEVLREGKSLTGDLGGTGK 461
TA D+A A L+ I ++ ++ +EH DR N C VLR+ +SL +GK
Sbjct: 99 TAEDLAWSCGFPDCAKFLTTIKCMQTIKASEHPDR--NDCVAVLRQKRSLGSVENTSGK 155
>AY296056-1|AAP50252.1| 158|Homo sapiens low density lipoprotein
receptor-related protein 2-binding protein protein.
Length = 158
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 285 TAPDIAGKDMANPTALLLSAIMMLRHLQLNEHADRVQNACYEVLREGKSLTGDLGGTGK 461
TA D+A A L+ I ++ ++ +EH DR N C VLR+ +SL +GK
Sbjct: 99 TAEDLAWSCGFPDCAKFLTTIKCMQTIKASEHPDR--NDCVAVLRQKRSLGSVENTSGK 155
>BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B
associated transcript 2 protein.
Length = 696
Score = 29.9 bits (64), Expect = 8.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 259 PFLPMLPEGVSPNPPTRPE 203
P LP P+G SP PPTR E
Sbjct: 40 PGLPQAPQGPSPRPPTRYE 58
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -2
Query: 258 RSCLCYRRASAPTPRLDLSTCPT*CHRTSWASPKRRTWRDPAPCSG 121
R CL P PR + P C P R TWR P+PC G
Sbjct: 461 RPCLQPCEHPEPCPRPEPIPLPAPCPSPE---PCRETWRSPSPCWG 503
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 29.9 bits (64), Expect = 8.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 259 PFLPMLPEGVSPNPPTRPE 203
P LP P+G SP PPTR E
Sbjct: 1501 PGLPQAPQGPSPRPPTRYE 1519
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -2
Query: 258 RSCLCYRRASAPTPRLDLSTCPT*CHRTSWASPKRRTWRDPAPCSG 121
R CL P PR + P C P R TWR P+PC G
Sbjct: 461 RPCLQPCEHPEPCPRPEPIPLPAPCPSPE---PCRETWRSPSPCWG 503
>AF190637-1|AAG17141.1| 1241|Homo sapiens nephrin protein.
Length = 1241
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 AVHKANIMRMSDGLF-LRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDV 158
A+H N+ R DGL+ L C T + ++ + Y T+ +QDP++ +V
Sbjct: 703 ALHLWNVTRADDGLYQLHCQNSEGTAEARLRLDVHYAPTI--RALQDPTEVNV 753
>AF035835-1|AAC39687.1| 1241|Homo sapiens nephrin protein.
Length = 1241
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 AVHKANIMRMSDGLF-LRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDV 158
A+H N+ R DGL+ L C T + ++ + Y T+ +QDP++ +V
Sbjct: 703 ALHLWNVTRADDGLYQLHCQNSEGTAEARLRLDVHYAPTI--RALQDPTEVNV 753
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,312,945
Number of Sequences: 237096
Number of extensions: 2324563
Number of successful extensions: 5808
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 5431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5784
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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