Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A15
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...   256   7e-69
Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical pr...   156   1e-38
AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical ...   155   3e-38
Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical pr...   153   1e-37
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...    31   0.93 
U23147-1|AAC46692.2|  674|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF068708-1|AAC17759.1|  452|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score =  256 bits (628), Expect = 7e-69
 Identities = 114/165 (69%), Positives = 141/165 (85%)
 Frame = +3

Query: 3   AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
           AVHKANIMR SDGLFL  CR+ A  Y DIKF+E YLDTVCLNMVQDPS++DVLVMPNLYG
Sbjct: 190 AVHKANIMRQSDGLFLSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVMPNLYG 249

Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFESVHGTAPDIAGKDMANPTALLLSAIMMLRH 362
           DI+SD+C+GLVGGLG+TPSGNIGK  A+FESVHGTAPDIAG+D ANPTALLLSA+MMLR+
Sbjct: 250 DILSDLCAGLVGGLGVTPSGNIGKGAAVFESVHGTAPDIAGQDKANPTALLLSAVMMLRY 309

Query: 363 LQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
           + L +HA R++ A ++ + +G++ TGDLGGTG CS +T  + +++
Sbjct: 310 MNLPQHAARIEKAVFDAIADGRAKTGDLGGTGTCSSFTADVCARV 354


>Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical
           protein C37E2.1 protein.
          Length = 379

 Score =  156 bits (379), Expect = 1e-38
 Identities = 71/165 (43%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3   AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
           AVHKANIM++ DGLFLR C  +A +Y  I+FE   +D  C+ +V  P +FDV+VMPNLYG
Sbjct: 212 AVHKANIMKLGDGLFLRTCEGVAKQYPKIQFESMIIDNTCMQLVSKPEQFDVMVMPNLYG 271

Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSAIMMLR 359
           +I+ ++ +GLVGG G+ P  ++G++  +FE     +  +  G+ +ANPTA++L A  ML 
Sbjct: 272 NIIDNLAAGLVGGAGVVPGQSVGRDFVIFEPGSRHSFQEAMGRSIANPTAMILCAANMLN 331

Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISK 494
           HL L+   + ++ A  +V++EGK  T DLGG     ++ +A+I K
Sbjct: 332 HLHLDAWGNSLRQAVADVVKEGKVRTRDLGGYATTVDFADAVIDK 376


>AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical
           protein C30F12.7 protein.
          Length = 373

 Score =  155 bits (376), Expect = 3e-38
 Identities = 73/166 (43%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   AVHKANIMRMSDGLFLRCCRDLATKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYG 182
           AVHKANI ++ DGLFL+  RD++  Y DIKFE   +D   + +V  P +FDV+VMPNLYG
Sbjct: 198 AVHKANIQKLGDGLFLKVVRDMSEDYKDIKFEAMIVDNASMQLVSKPQQFDVMVMPNLYG 257

Query: 183 DIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMMLR 359
           +I+S++  GLVGG GL    N+G   A+FE+    T   +AGKD+ANPTA + +++ MLR
Sbjct: 258 NIISNIACGLVGGPGLVSGMNLGDKYAVFETGTRNTGTSLAGKDIANPTAFIRASVDMLR 317

Query: 360 HLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAIISKL 497
           +L  + HA+ + +A ++ L E +  T D+GG    S+  NA +  +
Sbjct: 318 YLGCHYHANIISDALWKALVEQRIHTADIGGNNSASDVINATLQNI 363


>Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical
           protein F35G12.2 protein.
          Length = 396

 Score =  153 bits (370), Expect = 1e-37
 Identities = 73/164 (44%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   AVHKANIMRMSDGLFLRCCRDLA-TKYSDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLY 179
           AVHKANI ++ DGLFL+   D+A  +Y DI+F    +D   + +V  P +FDV++MPNLY
Sbjct: 219 AVHKANIQKLGDGLFLKVATDIAKAEYPDIEFNAMIVDNASMQLVSRPQQFDVMLMPNLY 278

Query: 180 GDIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSAIMML 356
           G+I+S++  GLVGG GL    NIG++ A+FE+    T   +AGKD+ANPTA + +A+ ML
Sbjct: 279 GNIISNIACGLVGGPGLVSGMNIGEDYAVFETGTRNTGTTLAGKDLANPTAFIRAAVDML 338

Query: 357 RHLQLNEHADRVQNACYEVLREGKSLTGDLGGTGKCSEYTNAII 488
           R L L  HAD + ++ +  L + +  T D+GGT K SE   +++
Sbjct: 339 RFLGLQSHADMISDSLFRTLVDKRIHTADIGGTSKSSELVQSVL 382


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 22/167 (13%)
 Frame = +3

Query: 12  KANIMRMSDGLFLRCCRDL-ATKY-SDIK-----FEERYLDTVCLNMVQDPSKFDVLVMP 170
           K  I++  DG F    +D+   KY +D K     +E R +D      ++    F V    
Sbjct: 234 KNTILKKYDGRFKDIFQDIYEKKYEADFKNNKIWYEHRLIDDQVAQALKSSGGF-VWACK 292

Query: 171 NLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALF--ESVHGTAP------DIAGKDMANPT 326
           N  GD+ SD+ +   G LGL  S  +  +G     E+ HGT                NP 
Sbjct: 293 NYDGDVQSDIVAQGYGSLGLMSSVLMCPDGKTIEAEAAHGTVTRHYREHQKGNSTSTNPI 352

Query: 327 ALLLSAIMMLRH---LQLNE----HADRVQNACYEVLREGKSLTGDL 446
           A + +    L H   L  NE     +  ++ AC + + EGK +T DL
Sbjct: 353 ASIFAWTRGLHHRGVLDNNEALKTFSLTLEKACIDTVEEGK-MTKDL 398


>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
 Frame = +3

Query: 12  KANIMRMSDGLFLRCCRDLATKY------SDIKFEERYLDTVCLNMVQDPSKFDVLVMPN 173
           K  I++  DG F     ++  +Y      + I +E R +D +    ++    F V    N
Sbjct: 212 KNTILKKYDGRFKDIFAEIYPEYEAEFKAAGIWYEHRLIDDMVAQAMKSDGGF-VWACKN 270

Query: 174 LYGDIMSDMCSGLVGGLGLTPSGNIGKNGALF--ESVHGT 287
             GD+ SD  +   G LGL  S  +  +G     E+ HGT
Sbjct: 271 YDGDVQSDSVAQGYGSLGLMTSVLVCPDGKTVEAEAAHGT 310


>U23147-1|AAC46692.2|  674|Caenorhabditis elegans Hypothetical
           protein C18H9.8 protein.
          Length = 674

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = -1

Query: 370 NWRCLNIMIAERSNAVGFAMSFPAISGAVP*TDSNRAPFLPMLPEGVSPNPPTRPEH 200
           +W  L  M  + ++     M  P+ + + P T + RAP     P      PP +P +
Sbjct: 32  SWSVLVSMTTKHASTTNTRMERPSTASSRPRTSTGRAPSARARPPSAMRAPPPQPTY 88


>AF068708-1|AAC17759.1|  452|Caenorhabditis elegans Hypothetical
           protein C18G1.7 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 611 HYMLLGIINFMPWHPNFKKVGSIYKNI 531
           HY  LGI+  MPW P F  + + + NI
Sbjct: 201 HYQKLGILTIMPW-PTFGTLPTQFPNI 226


>Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical
           protein C49C3.13 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 37  TVSS*GVVAISQPNTRTSSSKSATWTPFA*TWCRIPPSSTFW*CPTCTVTSCRT 198
           TVS+   V  ++P T T++  + T TP   T       +T    PT T T   T
Sbjct: 250 TVSTTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTT 303


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,133,620
Number of Sequences: 27780
Number of extensions: 358757
Number of successful extensions: 992
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)