Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_A14
(460 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 205 4e-52
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 192 3e-48
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 161 9e-39
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 151 9e-36
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 144 1e-33
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 142 2e-33
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 139 2e-32
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 138 5e-32
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 129 2e-29
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 125 4e-28
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 125 4e-28
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 120 1e-26
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 113 1e-24
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 112 3e-24
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 107 1e-22
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 107 1e-22
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 105 3e-22
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 88 7e-17
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 85 5e-16
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 84 2e-15
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 82 6e-15
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 77 2e-13
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 62 7e-09
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 60 2e-08
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 39 0.045
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 36 0.32
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.56
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.56
UniRef50_A7THH0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.97
UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative, Ty3-... 34 1.7
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 34 1.7
UniRef50_Q10KH1 Cluster: Retrotransposon protein, putative, Ty3-... 33 3.0
UniRef50_Q0RUS4 Cluster: Possible transcriptional regulator, Whi... 33 3.9
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 3.9
UniRef50_Q7XM47 Cluster: OSJNBb0018J12.12 protein; n=1; Oryza sa... 33 3.9
UniRef50_Q53L49 Cluster: Retrotransposon protein, putative, Ty3-... 33 3.9
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 33 3.9
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 3.9
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 33 3.9
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 3.9
UniRef50_A7LZU6 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_Q4DZB2 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_UPI0000499AB1 Cluster: hypothetical protein 215.t00008;... 32 6.8
UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n... 32 6.8
UniRef50_Q3AAF6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q6SHM5 Cluster: Glycosyl transferase, group 1 family pr... 32 6.8
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 32 6.8
UniRef50_Q7RI20 Cluster: Homo sapiens KIAA1035 protein-related; ... 32 6.8
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 6.8
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 32 6.8
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 6.8
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 32 6.8
UniRef50_A5FCI1 Cluster: Alpha-L-rhamnosidase precursor; n=3; Ba... 31 9.0
UniRef50_A3K7Z0 Cluster: Putative uncharacterized protein; n=3; ... 31 9.0
UniRef50_A1GCH8 Cluster: Putative uncharacterized protein; n=1; ... 31 9.0
UniRef50_Q8S656 Cluster: Putative Sorghum bicolor 22 kDa kafirin... 31 9.0
UniRef50_Q7XGB8 Cluster: Retrotransposon protein, putative, Ty3-... 31 9.0
UniRef50_Q2QSH3 Cluster: Retrotransposon protein, putative, Ty3-... 31 9.0
UniRef50_Q7RPX5 Cluster: Putative uncharacterized protein PY0132... 31 9.0
UniRef50_Q6BMB3 Cluster: 30S ribosomal protein S10, mitochondria... 31 9.0
UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeb... 31 9.0
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 205 bits (500), Expect = 4e-52
Identities = 97/136 (71%), Positives = 111/136 (81%), Gaps = 2/136 (1%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 370
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 371 RYKSGKNKWFFQKLRF 418
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 192 bits (468), Expect = 3e-48
Identities = 89/136 (65%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 370
KI KR+K+KPF+K V+Y HL+PTRYSVD +F+K + + LK P+K++K + +FEE
Sbjct: 61 KIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEE 120
Query: 371 RYKSGKNKWFFQKLRF 418
RYK+GKNKWFF KLRF
Sbjct: 121 RYKTGKNKWFFTKLRF 136
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 161 bits (390), Expect = 9e-39
Identities = 71/136 (52%), Positives = 100/136 (73%), Gaps = 2/136 (1%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 370
K+ KR+KIKPF+K VNYNHL+PTRY++D K S + + P++R++ + + FEE
Sbjct: 61 KVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEE 120
Query: 371 RYKSGKNKWFFQKLRF 418
R+++GKN+WFF KLRF
Sbjct: 121 RHQAGKNQWFFSKLRF 136
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 151 bits (365), Expect = 9e-36
Identities = 72/138 (52%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPRKV MGK
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVD-FSFEK---FSAKDLKDPAKRKKLRFNTRVRF 364
K +R+++K F K +NYNHLM TRYSV F +K F K+ + RK+ + +
Sbjct: 61 KFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQTVM 120
Query: 365 EERYKSGKNKWFFQKLRF 418
ER+ + KN+WFF KLRF
Sbjct: 121 RERFLAAKNRWFFTKLRF 138
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 144 bits (348), Expect = 1e-33
Identities = 60/132 (45%), Positives = 94/132 (71%)
Frame = +2
Query: 23 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 202
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K I
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTI 61
Query: 203 HKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 382
+RS++ F++ VN+ H +PTRY++D S E ++ D +K+ + + R F+ RY +
Sbjct: 62 QRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNA 121
Query: 383 GKNKWFFQKLRF 418
G N+WFFQ+LRF
Sbjct: 122 GSNRWFFQRLRF 133
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 142 bits (345), Expect = 2e-33
Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Frame = +2
Query: 23 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 202
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK +
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMV 112
Query: 203 HKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERY 376
KRS+IKPF+K VNYNHLMPTRY+++ K S + K+ + R+ + + E+RY
Sbjct: 113 EKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRY 172
Query: 377 KSGKNKWFFQKLRF 418
SGKN+WFF LRF
Sbjct: 173 TSGKNRWFFTPLRF 186
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 139 bits (337), Expect = 2e-32
Identities = 63/134 (47%), Positives = 92/134 (68%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERY 376
I +RS++ F++ VN+ H +PTRY+VD S E ++ D +KR + + R F+ RY
Sbjct: 61 TIARRSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARY 120
Query: 377 KSGKNKWFFQKLRF 418
+G + WFFQ+LRF
Sbjct: 121 NAGSSMWFFQRLRF 134
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 138 bits (334), Expect = 5e-32
Identities = 67/141 (47%), Positives = 95/141 (67%), Gaps = 9/141 (6%)
Frame = +2
Query: 23 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPRKVHKRMGKN 196
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M +
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRK 63
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK-FS------AKDLKDPAKRKKLRFNTR 355
I KR+ I+ FVK VNYNH+MPTRY+ + E F+ + AKR R +
Sbjct: 64 TILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAVK 123
Query: 356 VRFEERYKSGKNKWFFQKLRF 418
FE ++K+GK+KWFF KLRF
Sbjct: 124 KIFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 129 bits (312), Expect = 2e-29
Identities = 62/128 (48%), Positives = 86/128 (67%), Gaps = 3/128 (2%)
Frame = +2
Query: 44 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 220
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP+KV KRMG KI KRSK+
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKV 122
Query: 221 KPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 394
KPFVK ++YNHLMPTRY+++ K + K+P++R+ + + FEE+Y SGKNK
Sbjct: 123 KPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKNK 182
Query: 395 WFFQKLRF 418
WFF LRF
Sbjct: 183 WFFTPLRF 190
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 125 bits (302), Expect = 4e-28
Identities = 55/73 (75%), Positives = 65/73 (89%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKT 60
Query: 197 KIHKRSKIKPFVK 235
++HKRSKIKPF+K
Sbjct: 61 RLHKRSKIKPFIK 73
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 125 bits (302), Expect = 4e-28
Identities = 65/153 (42%), Positives = 97/153 (63%), Gaps = 18/153 (11%)
Frame = +2
Query: 14 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 193
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 194 NKIHKRSKIKPFVKGVNYNHLMPTRYSVDFS--------FEKFSAKDLKDPAKRKKLRFN 349
+I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+ KRK+LR N
Sbjct: 959 KQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRKN 1018
Query: 350 TRVRFEERY----------KSGKNKWFFQKLRF 418
R E+Y K ++++ F KLRF
Sbjct: 1019 LRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 120 bits (290), Expect = 1e-26
Identities = 64/146 (43%), Positives = 97/146 (66%), Gaps = 11/146 (7%)
Frame = +2
Query: 14 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 193
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+ K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 194 NKIHKRSKIKPFVKGVNYNHLMPTRYSV-DFSFEK-FSAKDLKDPAKRKK------LRFN 349
K+ K+S IKPF+K +N NH+MPTRY V DF + D+++ +K+ L FN
Sbjct: 77 EKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIKPLLQGIDMQEADGKKQALRALHLAFN 136
Query: 350 TR-VRFE-ERYKSGKNKWFFQK-LRF 418
+ + + E+ K+ K+ F +K LRF
Sbjct: 137 DKLINIQSEKGKAPKDLIFLRKPLRF 162
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 113 bits (273), Expect = 1e-24
Identities = 46/90 (51%), Positives = 70/90 (77%)
Frame = +2
Query: 11 SKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMG 190
+ G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRMG
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMG 73
Query: 191 KNKIHKRSKIKPFVKGVNYNHLMPTRYSVD 280
KI KR+ +KPF+K VN NH+MPTR ++
Sbjct: 74 SKKIQKRTSVKPFIKYVNLNHIMPTRGQIN 103
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 112 bits (270), Expect = 3e-24
Identities = 55/128 (42%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P KV K+M
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK---FSAKDLKDPAKRKKLRFNTRVRFE 367
KI KR K+K FVK VN NHLMPTRY V + + S + +++ + RK+ R + + E
Sbjct: 61 KIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVLE 120
Query: 368 ERYKSGKN 391
E + + +N
Sbjct: 121 ECFSNPEN 128
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 107 bits (257), Expect = 1e-22
Identities = 45/81 (55%), Positives = 64/81 (79%)
Frame = +2
Query: 29 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHK 208
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI K
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIK 156
Query: 209 RSKIKPFVKGVNYNHLMPTRY 271
RSK+K FVK +N NH++PTRY
Sbjct: 157 RSKVKAFVKYINVNHILPTRY 177
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 107 bits (257), Expect = 1e-22
Identities = 55/138 (39%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
Frame = +2
Query: 26 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 205
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M +
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 206 KRSKIKPFVKGVNYNHLMPTRYSV---DFSFEKFSAKD----LKDPAKRKKLRFNTRVRF 364
K++++K FVK VN+NH+M TR++V DF F+K S + LKD +K L
Sbjct: 63 KKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVL 121
Query: 365 EERYKSGKNKWFFQKLRF 418
++Y + K WFF+ L+F
Sbjct: 122 RQKYLNNKMAWFFKPLQF 139
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 105 bits (253), Expect = 3e-22
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 7/141 (4%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P K+ ++M
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAK 60
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFS-AKDLK----DPAKRKKLRFNTRV- 358
R+ +K F K +N NH+MPT+Y+V + E+F+ K +K + K + +
Sbjct: 61 VQEMRTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGKVYPISQKKAIS 118
Query: 359 -RFEERYKSGKNKWFFQKLRF 418
+F E Y+ GK W F KLRF
Sbjct: 119 SQFAEEYRKGKESWLFTKLRF 139
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 88.2 bits (209), Expect = 7e-17
Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 18/127 (14%)
Frame = +2
Query: 92 VKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRY 271
+K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRY 195
Query: 272 SVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY----------KSGKNKW 397
++ S E+ +LK+ KRK LR N R E+Y K ++++
Sbjct: 196 RLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRF 255
Query: 398 FFQKLRF 418
F KLRF
Sbjct: 256 LFSKLRF 262
Score = 32.7 bits (71), Expect = 3.9
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 14 KMGKIMKPGKVVLVLSGRYAG 76
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 85.4 bits (202), Expect = 5e-16
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +2
Query: 26 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 205
I+KPG V +VL GR+AG+KA++V+ +A VAGI PR++ M +
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPHNERGS---YAIVAGIAALPRRITNSMSDEEAV 61
Query: 206 KRSKIKPFVKGVNYNHLMPTRYSVDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYKS 382
R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++ F+ R
Sbjct: 62 CRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRILE 121
Query: 383 GKNKWFFQKL 412
++ WFF KL
Sbjct: 122 HRDTWFFTKL 131
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 83.8 bits (198), Expect = 2e-15
Identities = 43/74 (58%), Positives = 50/74 (67%)
Frame = +2
Query: 74 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNH 253
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV NYNH
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNH 63
Query: 254 LMPTRYSVDFSFEK 295
L RYSVD +K
Sbjct: 64 LKSIRYSVDIPLDK 77
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 81.8 bits (193), Expect = 6e-15
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 170 KVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK-KLRF 346
+V K+M + K KRSK K F+K +NY+HLMPTRY++D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 347 NTRVRFEERYKSGKNKWFFQKLRF 418
+ EER+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 81.0 bits (191), Expect = 1e-14
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = +2
Query: 32 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKR 211
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H+
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRC 78
Query: 212 SKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAK-DLKDPAKRKKLR 343
++ PF ++ R SV F + + K D K AKR K +
Sbjct: 79 ARTAPF----GCTEILTAR-SVAFENAQVTKKMDEKKQAKRSKCK 118
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 77.0 bits (181), Expect = 2e-13
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYD-EGTSDKPYGHAFVAGIDRYPRKVHKRMGK 193
M I K G+VV+VLSG+YAG+KA V+KN + E +K + GI + +K+ M K
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKNSNIESLCEKKI---IILGIKKEMKKIKYNMSK 57
Query: 194 NKIHKRSKIKPFVKGVNYNHLMPTRYSVD-----------FSFEKFSAKDLKDPAKRKKL 340
KI + K F+K +N H+ PTRY ++ + K K + ++ K+
Sbjct: 58 RKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNEHTNEKAKV 117
Query: 341 RF-NTRVRFEERYKSGKNKWFFQKLRF 418
+ ++R GKN WFF+K++F
Sbjct: 118 NLVSINNYLQDRLLRGKNLWFFKKMKF 144
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 61.7 bits (143), Expect = 7e-09
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +2
Query: 188 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 367
G+ + +R + +P V G + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 368 ERYKSGKNKWFFQKLRF 418
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 60.1 bits (139), Expect = 2e-08
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +2
Query: 35 PGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 214
P +V+V SG+ AG+KA+V+K DE + A + R P++ K + +
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE-------RYVLTACVVRIPKEPEDHQPKWIKRRNA 57
Query: 215 KIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERYKSGKN 391
K +K N HL+ TRY D ++D A+ KK+ N T+ + +K K
Sbjct: 58 KFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENKA 117
Query: 392 KWFFQKLRF 418
K+ F L F
Sbjct: 118 KFLFSSLSF 126
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 39.1 bits (87), Expect = 0.045
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +2
Query: 38 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRM--GKNKIH 205
GK++ L+G+YAG+ +VK+Y + + K + H V + ++ K K N
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTNTKFTNKNSKSFISKMNDQP 67
Query: 206 KRSKIKPFVKGVNYNHLMPTRYSVDFSF 289
K K K +K +N NH++ ++ S++ ++
Sbjct: 68 KIFKYKIKLKILNANHIIVSKKSINVNW 95
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 36.3 bits (80), Expect = 0.32
Identities = 11/36 (30%), Positives = 28/36 (77%)
Frame = +2
Query: 5 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 112
+P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 50 HPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 35.5 bits (78), Expect = 0.56
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 5 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDR-YPRKVHK 181
Y + +I + V +V++ RY G+ + E D+P GHAF AG+D R+V K
Sbjct: 212 YAYAIARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVDAGIMRRVGK 271
Query: 182 RMGK 193
G+
Sbjct: 272 FTGR 275
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.56
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 23 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 112
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_A7THH0 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 968
Score = 34.7 bits (76), Expect = 0.97
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = -3
Query: 272 NNGLALDDCSLHLLRKA*-----FSTACEFYFFPSFYEPCAGICRCRRRKHVRMVCQMCP 108
+NG +D C+ LRK FS C+F+ P C + CRR + R C P
Sbjct: 385 HNGPCMDPCTQIELRKCSCNYKEFSVPCQFHEKPRCNMKCESLMSCRRHRCTRRCCSGKP 444
Query: 107 RRNSLRQWLY 78
+ ++ L+
Sbjct: 445 MADKRKKMLF 454
>UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=7; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 1333
Score = 33.9 bits (74), Expect = 1.7
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2
Query: 360 RTLVLKRSFLRLAGSFRSFALNFSKL 283
RT+ L RSFL LAG +R F NFSK+
Sbjct: 760 RTVTLVRSFLGLAGYYRRFIENFSKI 785
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 33.9 bits (74), Expect = 1.7
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +2
Query: 8 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 115
P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_Q10KH1 Cluster: Retrotransposon protein, putative, Ty3-gypsy
subclass; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy subclass - Oryza sativa subsp. japonica (Rice)
Length = 1357
Score = 33.1 bits (72), Expect = 3.0
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = -2
Query: 456 LQQ*CLFFKITP*NLSFWKNHLFFPLLYLSSKRTLVLKRSFLRLAGSFRSFALNFSKL 283
LQ+ L+ K++ FW + + F L +T+ RSFL LAG +R F NFSK+
Sbjct: 880 LQEHQLYAKLS--KCEFWLSEVKF--LGHKQPKTVTQVRSFLGLAGYYRRFIENFSKI 933
>UniRef50_Q0RUS4 Cluster: Possible transcriptional regulator, WhiB
family; n=2; Rhodococcus sp. RHA1|Rep: Possible
transcriptional regulator, WhiB family - Rhodococcus sp.
(strain RHA1)
Length = 106
Score = 32.7 bits (71), Expect = 3.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 197 YFFPSFYEPCAGICRCRRRKHVRMVCQMCPRRNSLRQWLYGLRTGR*G 54
+FFP EP R RR + + +C MCP + + R+ + L TG G
Sbjct: 41 FFFPRVGEPHGA--RVRRERAAKTICSMCPVQENCRE--HALATGEYG 84
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 3.9
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 8 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 112
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q7XM47 Cluster: OSJNBb0018J12.12 protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBb0018J12.12
protein - Oryza sativa subsp. japonica (Rice)
Length = 902
Score = 32.7 bits (71), Expect = 3.9
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 360 RTLVLKRSFLRLAGSFRSFALNFSKL 283
+T+ RSFLRLAG +R F NFSK+
Sbjct: 562 KTVTQIRSFLRLAGYYRRFIENFSKI 587
>UniRef50_Q53L49 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 948
Score = 32.7 bits (71), Expect = 3.9
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 360 RTLVLKRSFLRLAGSFRSFALNFSKL 283
RT++ RSFL LAG +R F NFSK+
Sbjct: 691 RTVIQVRSFLGLAGYYRRFIENFSKI 716
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 32.7 bits (71), Expect = 3.9
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 8 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 112
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 71 PTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 3.9
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +2
Query: 8 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 112
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 32.7 bits (71), Expect = 3.9
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 8 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 112
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 82 PAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 3.9
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 109
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_A7LZU6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 265
Score = 32.3 bits (70), Expect = 5.2
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 248 NHLMPTRYSVD-FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWF 400
N L P+ YSVD ++++S K L PA KLRF R YK G N F
Sbjct: 207 NDLRPSTYSVDNVEWQQYS-KTLLAPATANKLRFEVRT-----YKEGDNSGF 252
>UniRef50_Q4DZB2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 224
Score = 32.3 bits (70), Expect = 5.2
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 182 FYEPCAGICRCRRRKHVRMVCQMCPRRNSLRQWLYGLRTGR 60
FY CR RRRKH + Q P RNS+ + G G+
Sbjct: 91 FYWTSNAECRPRRRKHSHLAAQRGPHRNSMECYHGGSSRGK 131
>UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 189
Score = 32.3 bits (70), Expect = 5.2
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 140 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKD 319
F+ I ++ +K KR ++ HKR I + N+N L T VD+ EK + +
Sbjct: 3 FLPEIQQFQQKQAKRKSQSSNHKRFLIIIY----NFNRLYLTEIEVDYKNEKITCSIFDE 58
Query: 320 PAKRKK 337
A RK+
Sbjct: 59 MASRKQ 64
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 5.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 281 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 382
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_UPI0000499AB1 Cluster: hypothetical protein 215.t00008;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 215.t00008 - Entamoeba histolytica HM-1:IMSS
Length = 260
Score = 31.9 bits (69), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 295 FFKAEVYRITGWH*MIVVYTFYERLDFRPLVNFIFSHPFMNL 170
F + E ++ H + VY ++ER DF L NFI+ H L
Sbjct: 58 FIELEERQLVKSHNLRCVYFYFERKDFFELENFIYEHKLSKL 99
>UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCEB7 UniRef100 entry -
Gallus gallus
Length = 75
Score = 31.9 bits (69), Expect = 6.8
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 185 MGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRF 364
+GK K K+ K K + + HL+ ++ + + +K + LK K+K +F+ + +
Sbjct: 1 VGKKKKEKKKKKKENYRNILEAHLLKSKQTNKQTNKKHPSFTLKKKKKKKAFKFSGKFKS 60
Query: 365 EER 373
EER
Sbjct: 61 EER 63
>UniRef50_Q3AAF6 Cluster: Putative uncharacterized protein; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: Putative
uncharacterized protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 266
Score = 31.9 bits (69), Expect = 6.8
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 155 DRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFE-KFSAKDLKDPAKR 331
D+Y + GKN+ +IK VKG+ P+RY F++ K K+ +D K
Sbjct: 177 DKYKHQQKLLPGKNE----REIKLLVKGIREGTAAPSRYMESFNYVIKIKTKNARDETKE 232
Query: 332 KKLRFNT 352
++++++
Sbjct: 233 VEIKYSS 239
>UniRef50_Q6SHM5 Cluster: Glycosyl transferase, group 1 family
protein; n=4; cellular organisms|Rep: Glycosyl
transferase, group 1 family protein - uncultured
bacterium 314
Length = 387
Score = 31.9 bits (69), Expect = 6.8
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 134 HAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDL 313
H +AG + +++ G ++++ K+ +G+N N+ P + S+ EKFS K+
Sbjct: 137 HLIIAGSNFIFSHINENYGDFFLNRKRKLLVIFRGINANYFNPQKISLS-KIEKFSKKNS 195
Query: 314 KDPAK 328
D K
Sbjct: 196 IDRDK 200
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 31.9 bits (69), Expect = 6.8
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -2
Query: 153 MPATKACPYGLSDVPSS*FFTTMALRPAYRPLRTSTTFPGFIILPILDG 7
+P+T A PY S + + YR +R S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_Q7RI20 Cluster: Homo sapiens KIAA1035 protein-related;
n=3; Plasmodium (Vinckeia)|Rep: Homo sapiens KIAA1035
protein-related - Plasmodium yoelii yoelii
Length = 1563
Score = 31.9 bits (69), Expect = 6.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 161 YPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLK 316
Y +++ K K + + + K NYNH+ +YSVDFS +KF ++K
Sbjct: 401 YTKELKKEKEKRQTYMNEFLNDINKETNYNHV---KYSVDFS-DKFLVSNIK 448
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.9 bits (69), Expect = 6.8
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +2
Query: 2 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 97
EY + + K PG + ++L+GR+ GR+A+++K
Sbjct: 25 EYTT-LRKSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 31.9 bits (69), Expect = 6.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 260 PTRYSVDFSFEKFSAKDLKDPAKRKKLRF 346
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 6.8
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +2
Query: 35 PGKVVLVLSGRYAGRKAIVVKNYDEG 112
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 31.9 bits (69), Expect = 6.8
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 251 HLMPTRYSVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 397
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_A5FCI1 Cluster: Alpha-L-rhamnosidase precursor; n=3;
Bacteroidetes|Rep: Alpha-L-rhamnosidase precursor -
Flavobacterium johnsoniae UW101
Length = 916
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 113 CPRRNSLRQWLYGLRTGR*GPAPLFQVS*SYPSWMD 6
CP+RN + WL TG G + LF Y W+D
Sbjct: 495 CPQRNERQPWLGDRTTGAYGESFLFDNQTLYAKWLD 530
>UniRef50_A3K7Z0 Cluster: Putative uncharacterized protein; n=3;
Rhodobacterales|Rep: Putative uncharacterized protein -
Sagittula stellata E-37
Length = 379
Score = 31.5 bits (68), Expect = 9.0
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2
Query: 96 FTTMALRPAYRPLRTSTTFPGFIIL 22
F T A+RP YRPLRTS GF+IL
Sbjct: 226 FPTGAMRPIYRPLRTS---DGFVIL 247
>UniRef50_A1GCH8 Cluster: Putative uncharacterized protein; n=1;
Salinispora arenicola CNS205|Rep: Putative
uncharacterized protein - Salinispora arenicola CNS205
Length = 494
Score = 31.5 bits (68), Expect = 9.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 25 DYETWKSGAGPQRPVRRP*SHCRKELRRGHI*QTIRTCFRRRHRQI 162
D+ W SG G +RP RR R ++ RGH ++ RR HR +
Sbjct: 354 DHGGW-SGRGDRRPSRRVPGQVRHQVHRGHR-PRLQPAHRRHHRHL 397
>UniRef50_Q8S656 Cluster: Putative Sorghum bicolor 22 kDa kafirin
cluster; n=2; Oryza sativa|Rep: Putative Sorghum bicolor
22 kDa kafirin cluster - Oryza sativa (Rice)
Length = 1143
Score = 31.5 bits (68), Expect = 9.0
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2
Query: 360 RTLVLKRSFLRLAGSFRSFALNFSKL 283
RT+ RSFL LAG +R F NFSK+
Sbjct: 470 RTVTQVRSFLGLAGYYRRFIENFSKI 495
>UniRef50_Q7XGB8 Cluster: Retrotransposon protein, putative,
Ty3-gypsy subclass; n=2; Oryza sativa|Rep:
Retrotransposon protein, putative, Ty3-gypsy subclass -
Oryza sativa subsp. japonica (Rice)
Length = 1264
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 342 RSFLRLAGSFRSFALNFSKL 283
RSFLRLAG +R F NFSK+
Sbjct: 373 RSFLRLAGYYRRFIENFSKI 392
>UniRef50_Q2QSH3 Cluster: Retrotransposon protein, putative, Ty3-gypsy
subclass, expressed; n=12; Magnoliophyta|Rep:
Retrotransposon protein, putative, Ty3-gypsy subclass,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1656
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2
Query: 360 RTLVLKRSFLRLAGSFRSFALNFSKL 283
+T+ RSFL LAG++R F NFSK+
Sbjct: 976 KTVTQVRSFLGLAGNYRRFIENFSKI 1001
>UniRef50_Q7RPX5 Cluster: Putative uncharacterized protein PY01329;
n=18; Plasmodium (Vinckeia)|Rep: Putative
uncharacterized protein PY01329 - Plasmodium yoelii
yoelii
Length = 5432
Score = 31.5 bits (68), Expect = 9.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 242 NYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRV 358
NY+ ++PT+Y F FS ++ D +K++K N R+
Sbjct: 551 NYDVVIPTKYDFQFKLSNFSI-NIYDDSKKRKYIINNRI 588
>UniRef50_Q6BMB3 Cluster: 30S ribosomal protein S10, mitochondrial
precursor; n=4; Saccharomycetaceae|Rep: 30S ribosomal
protein S10, mitochondrial precursor - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 267
Score = 31.5 bits (68), Expect = 9.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 221 KPFVKGVNYNHLMPTRYSVDF--SFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 394
K ++GV YN L+ TR S+DF + SA D+ P K + EE KS K
Sbjct: 192 KHAIEGVKYNALIHTRESLDFCEKLDALSADDMHMPDAYKGSDDPIANKVEELLKSDTFK 251
Query: 395 WFFQK 409
+F +
Sbjct: 252 KYFDE 256
>UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeba
histolytica|Rep: 60S ribosomal protein L6 - Entamoeba
histolytica
Length = 92
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 14 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKP 127
K+ K + PG +++++ G+YAG+K VV +G S P
Sbjct: 53 KLRKSIVPGAILIIVGGKYAGKK--VVSLPSQGVSSAP 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,655,265
Number of Sequences: 1657284
Number of extensions: 9603944
Number of successful extensions: 25450
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 24744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25427
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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