Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A13
         (361 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri...    64   9e-10
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri...    55   4e-07
UniRef50_UPI000023E632 Cluster: hypothetical protein FG01079.1; ...    46   2e-04
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame...    38   0.053
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic...    37   0.12 
UniRef50_O28918 Cluster: Uncharacterized protein AF_1353 precurs...    32   3.5  
UniRef50_Q1QZB1 Cluster: Lytic transglycosylase; n=1; Chromohalo...    31   6.1  
UniRef50_UPI0000F2CBB0 Cluster: PREDICTED: hypothetical protein;...    31   8.0  

>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
           precursor; n=847; cellular organisms|Rep: ATP synthase
           subunit alpha, mitochondrial precursor - Drosophila
           melanogaster (Fruit fly)
          Length = 552

 Score = 63.7 bits (148), Expect = 9e-10
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = +3

Query: 6   FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
           FEKEF QHIKTS Q+LL TIAKDG I+  SDA LK IV  F++TF
Sbjct: 506 FEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF 550


>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
           precursor; n=489; cellular organisms|Rep: ATP synthase
           subunit alpha, mitochondrial precursor - Homo sapiens
           (Human)
          Length = 553

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = +3

Query: 6   FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
           FE  F  H+ + HQ+LL TI  DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>UniRef50_UPI000023E632 Cluster: hypothetical protein FG01079.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG01079.1 - Gibberella zeae PH-1
          Length = 175

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 19/45 (42%), Positives = 31/45 (68%)
 Frame = +3

Query: 6   FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
           +E +F  H+KT+   LLATI K+G I+ +++A LK +V  F+ +F
Sbjct: 129 WESDFLAHLKTNETELLATIDKEGAISKDTEAKLKDVVQSFVKSF 173


>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
           Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
           Paramecium tetraurelia
          Length = 612

 Score = 37.9 bits (84), Expect = 0.053
 Identities = 15/42 (35%), Positives = 28/42 (66%)
 Frame = +3

Query: 6   FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFI 131
           FE++F  H++T++ ++L  I   G+++ + DA LK I+  FI
Sbjct: 562 FEEKFLTHLRTNYPAMLERIRSTGELSKQDDAELKSILEVFI 603


>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
           Firmicutes|Rep: ATP synthase subunit alpha -
           Ruminococcus albus
          Length = 523

 Score = 36.7 bits (81), Expect = 0.12
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 6   FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATFTQSQ 152
           +EK+    +  SH  +LA+I    ++T E++ ALK ++ DF   F Q +
Sbjct: 475 YEKDLFLFLDESHPDILASIRDTKELTAENEKALKNVLKDFADKFMQQK 523


>UniRef50_O28918 Cluster: Uncharacterized protein AF_1353 precursor;
           n=1; Archaeoglobus fulgidus|Rep: Uncharacterized protein
           AF_1353 precursor - Archaeoglobus fulgidus
          Length = 353

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 193 CCRLQLSLIKLSFYCDWVKVAMKSVTIFLSAASDSGVI 80
           C  + +   K   YCD VK+ +     FL++ SDSGV+
Sbjct: 148 CYLITIDAGKQELYCDGVKMTLGGDYYFLNSVSDSGVV 185


>UniRef50_Q1QZB1 Cluster: Lytic transglycosylase; n=1;
           Chromohalobacter salexigens DSM 3043|Rep: Lytic
           transglycosylase - Chromohalobacter salexigens (strain
           DSM 3043 / ATCC BAA-138 / NCIMB13768)
          Length = 484

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +3

Query: 18  FTQHIKTSHQSLLATIAKDGQITPESDAALKKIVT-DFIATFTQS 149
           + + + T+  +LLA +  D + + E DAAL  I++ DFI  FT++
Sbjct: 8   YMRPVATAFVALLALLIPDNRTSHEPDAALSAILSRDFIQVFTRN 52


>UniRef50_UPI0000F2CBB0 Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 252

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 7   SRRNSPSTSRLATRACWPPLLRMVRSPPSL 96
           S R S S  R   RACWP  L ++  PP L
Sbjct: 38  SARTSRSPPRATKRACWPARLPLLSFPPLL 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,925,844
Number of Sequences: 1657284
Number of extensions: 5653242
Number of successful extensions: 13841
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13840
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)