Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_A13
(361 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X65460-1|CAA46452.1| 553|Homo sapiens ATP synthase alpha subuni... 55 8e-08
X59066-1|CAA41789.1| 553|Homo sapiens H(+)-transporting ATP sy... 55 8e-08
D28126-1|BAA05672.1| 553|Homo sapiens ATP synthase alpha subuni... 55 8e-08
D14710-1|BAA03531.1| 553|Homo sapiens ATP synthase alpha subuni... 55 8e-08
BT007209-1|AAP35873.1| 553|Homo sapiens ATP synthase, H+ transp... 55 8e-08
BC067385-1|AAH67385.1| 553|Homo sapiens ATP synthase, H+ transp... 55 8e-08
BC064562-1|AAH64562.1| 553|Homo sapiens ATP synthase, H+ transp... 55 8e-08
BC039135-1|AAH39135.2| 553|Homo sapiens ATP synthase, H+ transp... 55 8e-08
BC019310-1|AAH19310.1| 553|Homo sapiens ATP synthase, H+ transp... 55 8e-08
BC016046-1|AAH16046.1| 553|Homo sapiens ATP synthase, H+ transp... 55 8e-08
BC008028-1|AAH08028.2| 450|Homo sapiens ATP5A1 protein protein. 55 8e-08
BC007299-1|AAH07299.1| 408|Homo sapiens ATP5A1 protein protein. 55 8e-08
BC003119-1|AAH03119.1| 368|Homo sapiens ATP5A1 protein protein. 55 8e-08
BC011384-1|AAH11384.1| 553|Homo sapiens ATP synthase, H+ transp... 54 1e-07
AB029394-1|BAB20087.1| 762|Homo sapiens SEMB protein. 30 2.5
AK124561-1|BAC85886.1| 173|Homo sapiens protein ( Homo sapiens ... 29 5.7
U82756-1|AAC02261.1| 520|Homo sapiens WD splicing factor Hprp4p... 28 7.6
CR457105-1|CAG33386.1| 521|Homo sapiens PRPF4 protein. 28 7.6
BC007424-1|AAH07424.1| 521|Homo sapiens PRP4 pre-mRNA processin... 28 7.6
BC001588-1|AAH01588.1| 522|Homo sapiens PRP4 pre-mRNA processin... 28 7.6
AY572489-1|AAS78572.1| 521|Homo sapiens 60 kDa U4/U6 snRNP-spec... 28 7.6
AL449305-8|CAI10969.1| 521|Homo sapiens PRP4 pre-mRNA processin... 28 7.6
AL449305-7|CAI10968.1| 522|Homo sapiens PRP4 pre-mRNA processin... 28 7.6
AF016369-1|AAC51925.1| 522|Homo sapiens U4/U6 small nuclear rib... 28 7.6
AF001687-1|AAB87640.1| 521|Homo sapiens U4/U6 snRNP 60 kDa prot... 28 7.6
AB209797-1|BAD93034.1| 537|Homo sapiens PRPF4 protein variant p... 28 7.6
>X65460-1|CAA46452.1| 553|Homo sapiens ATP synthase alpha subunit
protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>X59066-1|CAA41789.1| 553|Homo sapiens H(+)-transporting ATP
synthase protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>D28126-1|BAA05672.1| 553|Homo sapiens ATP synthase alpha subunit
protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>D14710-1|BAA03531.1| 553|Homo sapiens ATP synthase alpha subunit
protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>BT007209-1|AAP35873.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit,
isoform protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>BC067385-1|AAH67385.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>BC064562-1|AAH64562.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>BC039135-1|AAH39135.2| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>BC019310-1|AAH19310.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>BC016046-1|AAH16046.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>BC008028-1|AAH08028.2| 450|Homo sapiens ATP5A1 protein protein.
Length = 450
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 404 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 448
>BC007299-1|AAH07299.1| 408|Homo sapiens ATP5A1 protein protein.
Length = 408
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 362 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 406
>BC003119-1|AAH03119.1| 368|Homo sapiens ATP5A1 protein protein.
Length = 368
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE F H+ + HQ+LL TI DG+I+ +SDA LK+IVT+F+A F
Sbjct: 322 FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 366
>BC011384-1|AAH11384.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +3
Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140
FE +F H+ + HQ+LL TI +G+I+ +SDA LK+IVT+F+A F
Sbjct: 507 FENDFLSHVVSQHQALLGTIRAEGKISEQSDAKLKEIVTNFLAGF 551
>AB029394-1|BAB20087.1| 762|Homo sapiens SEMB protein.
Length = 762
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = +1
Query: 7 SRRNSPSTSRLATRACWPPLLRMV-----RSPPSLMLHSRRSS 120
SR + PSTS ATR+C PP+L + SPPS + RSS
Sbjct: 296 SRGSCPSTSS-ATRSCSPPILPQLPTSTQSSPPSGQVGGTRSS 337
>AK124561-1|BAC85886.1| 173|Homo sapiens protein ( Homo sapiens
cDNA FLJ42570 fis, clone BRACE3007767. ).
Length = 173
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 137 GSNEVCDDLLECSIRLGGDL 78
GS+ VCDD L C++ G D+
Sbjct: 22 GSDHVCDDRLRCALMTGSDV 41
>U82756-1|AAC02261.1| 520|Homo sapiens WD splicing factor Hprp4p
protein.
Length = 520
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 238 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 272
>CR457105-1|CAG33386.1| 521|Homo sapiens PRPF4 protein.
Length = 521
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 239 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 273
>BC007424-1|AAH07424.1| 521|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog (yeast) protein.
Length = 521
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 239 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 273
>BC001588-1|AAH01588.1| 522|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog (yeast) protein.
Length = 522
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 240 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 274
>AY572489-1|AAS78572.1| 521|Homo sapiens 60 kDa U4/U6
snRNP-specific spliceosomal protein protein.
Length = 521
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 239 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 273
>AL449305-8|CAI10969.1| 521|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog (yeast) protein.
Length = 521
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 239 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 273
>AL449305-7|CAI10968.1| 522|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog (yeast) protein.
Length = 522
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 240 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 274
>AF016369-1|AAC51925.1| 522|Homo sapiens U4/U6 small nuclear
ribonucleoprotein hPrp4 protein.
Length = 522
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 240 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 274
>AF001687-1|AAB87640.1| 521|Homo sapiens U4/U6 snRNP 60 kDa protein
protein.
Length = 521
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 239 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 273
>AB209797-1|BAD93034.1| 537|Homo sapiens PRPF4 protein variant
protein.
Length = 537
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 19 SPSTSRLATRACWPPLLRMVRSPPSLMLHSRRSSQT 126
SP++ LAT ACW L ++ P +LH+ R T
Sbjct: 255 SPNSKMLAT-ACWSGLCKLWSVPDCNLLHTLRGHNT 289
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,194,530
Number of Sequences: 237096
Number of extensions: 863239
Number of successful extensions: 1730
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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