BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_A13 (361 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 60 3e-10 AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 60 3e-10 AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 60 3e-10 Z49968-12|CAA90264.1| 880|Caenorhabditis elegans Hypothetical p... 30 0.56 Z49966-8|CAA90246.1| 880|Caenorhabditis elegans Hypothetical pr... 30 0.56 Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical pr... 27 5.2 Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 27 5.2 Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 27 5.2 Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 27 5.2 AL110487-13|CAB54429.2| 268|Caenorhabditis elegans Hypothetical... 27 5.2 AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted 2-im... 27 5.2 >AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical protein H28O16.1d protein. Length = 511 Score = 60.5 bits (140), Expect = 3e-10 Identities = 25/45 (55%), Positives = 37/45 (82%) Frame = +3 Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140 FEKEF H+++S Q+LL TI ++GQI+P++DA LK +V +F+ATF Sbjct: 465 FEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 509 >AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical protein H28O16.1c protein. Length = 503 Score = 60.5 bits (140), Expect = 3e-10 Identities = 25/45 (55%), Positives = 37/45 (82%) Frame = +3 Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140 FEKEF H+++S Q+LL TI ++GQI+P++DA LK +V +F+ATF Sbjct: 457 FEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 501 >AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical protein H28O16.1a protein. Length = 538 Score = 60.5 bits (140), Expect = 3e-10 Identities = 25/45 (55%), Positives = 37/45 (82%) Frame = +3 Query: 6 FEKEFTQHIKTSHQSLLATIAKDGQITPESDAALKKIVTDFIATF 140 FEKEF H+++S Q+LL TI ++GQI+P++DA LK +V +F+ATF Sbjct: 492 FEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 536 >Z49968-12|CAA90264.1| 880|Caenorhabditis elegans Hypothetical protein M110.7 protein. Length = 880 Score = 29.9 bits (64), Expect = 0.56 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = -1 Query: 220 HRLNYIYPKCCRLQLSLIKLSFYCDWVKVAMKSVTIF 110 +RL Y+ CC Q+ ++K + YC +VK+ ++S IF Sbjct: 775 NRLAYV---CCVNQMEIVKNAQYCYYVKLPIESFGIF 808 >Z49966-8|CAA90246.1| 880|Caenorhabditis elegans Hypothetical protein M110.7 protein. Length = 880 Score = 29.9 bits (64), Expect = 0.56 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = -1 Query: 220 HRLNYIYPKCCRLQLSLIKLSFYCDWVKVAMKSVTIF 110 +RL Y+ CC Q+ ++K + YC +VK+ ++S IF Sbjct: 775 NRLAYV---CCVNQMEIVKNAQYCYYVKLPIESFGIF 808 >Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical protein B0391.5 protein. Length = 378 Score = 26.6 bits (56), Expect = 5.2 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 359 DINTFHDCFNIQCSPY 312 D NT + C+ IQC PY Sbjct: 346 DYNTSNFCYTIQCGPY 361 >Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical protein F26E4.11 protein. Length = 564 Score = 26.6 bits (56), Expect = 5.2 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 244 HLQLLT*DHRLNYIYPKCCRLQLSLIKLSFYCDWVKVAM 128 HLQ +T RL +I P C R + LS + +V +AM Sbjct: 163 HLQFIT-CQRLKHISPSCDRGSQKISFLSLFLFFVSIAM 200 >Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical protein F26E4.11 protein. Length = 564 Score = 26.6 bits (56), Expect = 5.2 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 244 HLQLLT*DHRLNYIYPKCCRLQLSLIKLSFYCDWVKVAM 128 HLQ +T RL +I P C R + LS + +V +AM Sbjct: 163 HLQFIT-CQRLKHISPSCDRGSQKISFLSLFLFFVSIAM 200 >Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical protein C07A9.8 protein. Length = 453 Score = 26.6 bits (56), Expect = 5.2 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1 Query: 178 LSLIKLSFYCDWVKVAMKSVTIFLSAASD 92 +++I+ FY W+KVAM+ + F A D Sbjct: 319 MTIIEFIFYMGWLKVAMELLNPFGEDADD 347 >AL110487-13|CAB54429.2| 268|Caenorhabditis elegans Hypothetical protein Y39E4B.8 protein. Length = 268 Score = 26.6 bits (56), Expect = 5.2 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 184 ICSI*DKYNSVYGLTLKVVNGQL 252 +C I DK+N+VY + LKV+ L Sbjct: 117 LCEINDKHNTVYAVYLKVLEPPL 139 >AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted 2-immunoglobulin-domainprotein ZIG-8 protein. Length = 268 Score = 26.6 bits (56), Expect = 5.2 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 184 ICSI*DKYNSVYGLTLKVVNGQL 252 +C I DK+N+VY + LKV+ L Sbjct: 117 LCEINDKHNTVYAVYLKVLEPPL 139 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,976,628 Number of Sequences: 27780 Number of extensions: 140744 Number of successful extensions: 382 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 360 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 382 length of database: 12,740,198 effective HSP length: 73 effective length of database: 10,712,258 effective search space used: 492763868 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -