Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A12
         (445 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   6.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   9.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +3

Query: 201 PRGD---ISESEHLENGMADSLDERRFQEAERARVSEILNESRDAPDDEINL 347
           P+GD       E L NG+   L  +R + ++ A  + +   +  + D  IN+
Sbjct: 839 PKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINM 890


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 82  NSLFILTTWLICV 44
           N LF+L+T+ IC+
Sbjct: 236 NFLFVLSTFSICI 248


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 252 YPPCRSRGAPTRRCPR 205
           YP  RS G P  R PR
Sbjct: 634 YPDRRSMGYPFDRMPR 649


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 98  HEGQH*QPLHPDH 60
           H G H Q  HP H
Sbjct: 166 HMGHHMQEQHPQH 178



 Score = 20.2 bits (40), Expect = 9.2
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +2

Query: 185 DVRGASPRGHLRVGAPRERHGG*PGRETIPGG 280
           D     P   LR G P   +GG P     P G
Sbjct: 46  DPGSCDPSVGLRQGIPPHHYGGPPSGGQPPQG 77


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 98  HEGQH*QPLHPDH 60
           H G H Q  HP H
Sbjct: 168 HMGHHMQEQHPQH 180


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = -2

Query: 327 EHRVTHSGSRRHELSQPP 274
           EH  TH+    H + + P
Sbjct: 36  EHNYTHNNEMYHSVKEEP 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,364
Number of Sequences: 336
Number of extensions: 1891
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)