Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_A12
(445 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 33 0.10
05_07_0153 - 28051496-28051801,28051933-28052271 31 0.42
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 30 0.73
02_04_0452 + 23044190-23045227 30 0.96
02_05_1178 + 34758306-34758411,34759449-34759627 29 1.7
11_06_0470 + 23977394-23977503,23977755-23977922,23978724-239793... 29 2.2
06_03_0881 - 25623679-25623843,25624104-25624195,25624287-256244... 28 2.9
05_03_0113 + 8526595-8527440,8527662-8528357 28 2.9
04_04_1398 - 33245268-33245876,33247516-33247608,33247639-332478... 28 2.9
02_05_0405 + 28708077-28708391,28708478-28708573,28709030-287094... 28 2.9
01_05_0470 + 22531210-22531530,22532423-22532594,22532685-225328... 28 3.9
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 28 3.9
06_03_1089 - 27521291-27522124 27 5.1
06_01_0817 - 6185881-6187074 27 5.1
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 27 5.1
09_04_0112 - 14757947-14758972 27 6.8
04_03_0870 + 20431215-20431419,20432559-20433439,20433829-204339... 27 6.8
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 27 9.0
03_06_0742 + 35900505-35900519,35901230-35901281,35901647-359017... 27 9.0
02_02_0694 + 13013966-13014361 27 9.0
02_01_0419 - 3071796-3072502,3073198-3073432 27 9.0
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 27 9.0
01_06_0613 + 30615335-30615980,30616072-30616231,30616350-306163... 27 9.0
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 33.1 bits (72), Expect = 0.10
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 312 HSGSRRHELSQP--PGIVSRPGYPPCRSRGAPTRRCPRGEAPRTSAA 178
H GS EL P PG+ +RP P S+ A R AP TSAA
Sbjct: 16 HGGSIPSELPLPSAPGVSARPADRPVASQAAAPAASARPRAPATSAA 62
>05_07_0153 - 28051496-28051801,28051933-28052271
Length = 214
Score = 31.1 bits (67), Expect = 0.42
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 279 PPGIVSRPGYPPCRSRGAPTRRCPRGEAPRTSAAR*SSYVSADGVDD 139
PP + + GY C SR P P+ +AA+ +SY D DD
Sbjct: 139 PPSLDTGAGYAYCYSRQPPPPPAPQWGCYGQAAAKSASYAMFDAADD 185
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 30.3 bits (65), Expect = 0.73
Identities = 25/57 (43%), Positives = 26/57 (45%)
Frame = +1
Query: 133 KNIVNAIGAYVRRLPSGRRPRGFPAGTSPSRSTSRTAWRIAWTRDDSRRLRELVSPR 303
KN G R PS RR R G S SRS SR+ R R DSR R SPR
Sbjct: 130 KNRCYRRGRSYSRSPSPRRGRS--RGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPR 184
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.9 bits (64), Expect = 0.96
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 336 HRQEHRVTHSGSRRHELSQPPGIVSRPGYPPCRSRGAPTRRCPRGEAPRTSA 181
H H +HS SR H S P + P PP + A T A TSA
Sbjct: 178 HGHAHSHSHSHSRAHNPSTRPPTSAPPPPPPAAASSATTAPATTTGAAATSA 229
>02_05_1178 + 34758306-34758411,34759449-34759627
Length = 94
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 324 HRVTHSGSRRHELSQPPGIVSRPGYPPCRSR 232
HRVT +GS RHE S+ + S P PP S+
Sbjct: 61 HRVTQAGSSRHEPSKRLALPSSP--PPLESQ 89
>11_06_0470 +
23977394-23977503,23977755-23977922,23978724-23979367,
23979584-23979823,23980175-23980296,23980397-23981080
Length = 655
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 321 RVTHSGSRRHELSQPPGIVSRPGYPPCRSRGAPTRRCPRGEAPRT 187
+V+ S ++ + + P + Y CR G +RRCP + PRT
Sbjct: 596 QVSSSAPKKQKCTTPGAVKQTRFYRVCRKPGHDSRRCP--DNPRT 638
>06_03_0881 -
25623679-25623843,25624104-25624195,25624287-25624446,
25624586-25624668,25624845-25624913,25625480-25625555,
25625645-25625895,25626387-25626537
Length = 348
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 187 RPRGFPAGTSPSRSTSRTAWRIAW 258
R RG AGTS TS A RIAW
Sbjct: 119 RQRGMGAGTSSDGRTSDEALRIAW 142
>05_03_0113 + 8526595-8527440,8527662-8528357
Length = 513
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 191 RGASPRGHLRVGAPRERHGG*PGRETIPGG 280
+G PRG GA R GG PGR GG
Sbjct: 70 QGIRPRGSRSFGARRGGFGGRPGRSGFGGG 99
>04_04_1398 -
33245268-33245876,33247516-33247608,33247639-33247827,
33248146-33248496
Length = 413
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = -2
Query: 306 GSRRHELSQP-PGIVS--RPGYPPCRSRGAPTRR 214
GS++ +L++ PGI+ RP PP SRG+ RR
Sbjct: 5 GSKKRKLAEEDPGIIGAGRPPSPPSGSRGSADRR 38
>02_05_0405 +
28708077-28708391,28708478-28708573,28709030-28709450,
28710051-28710141,28710483-28710819,28710905-28711053,
28711782-28712295
Length = 640
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 279 PPGIVSRPGYPPCRSRGAPTRRCPRGEAPRTSAA 178
PP P PP + A +R R + PRTSAA
Sbjct: 47 PPAAQPPPPTPPAPAPAAEEKRKVRNDHPRTSAA 80
>01_05_0470 +
22531210-22531530,22532423-22532594,22532685-22532820,
22532913-22533126,22533295-22533438,22533528-22533635,
22533724-22533820,22533904-22534035,22534188-22534320,
22534439-22534604
Length = 540
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 190 PRGFPAGTSPSRSTSRTAWRIAWTRDDSRR 279
P + GTS S S S AWR W ++ R+
Sbjct: 425 PGEYLPGTSQSSSPSMLAWRTLWPQERKRQ 454
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -2
Query: 330 QEHRVTHSG-SRRHELSQPPGIVSRPGYPPCRSRGAPT----RRCPRGEAP 193
+ H H+ + H SQ PG +R P R GAP RR P AP
Sbjct: 35 RHHHAKHAKRNAAHPPSQAPGPAARHAPGPARHHGAPAPHPGRRSPPAPAP 85
>06_03_1089 - 27521291-27522124
Length = 277
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 131 PKTSSTPSALTYDDYRAADVRGASPRGHLRVGAPRERHGG*PGRETIPGG 280
P S TP + R+ADVR P GH + P H G +PGG
Sbjct: 175 PAASPTPPPPPPTE-RSADVRPMPPEGHFFIPHPHFMH----GHFLVPGG 219
>06_01_0817 - 6185881-6187074
Length = 397
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -2
Query: 279 PPGIVSRPGYPP-CRSRGAPT 220
PPG + G+ P CRS GAPT
Sbjct: 18 PPGSAAHAGHAPLCRSCGAPT 38
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 234 ENGMADSLDERRFQEAERARVSEILNESRDAPDDEINLD 350
+N ++DS E+ +AER SE + D D++N+D
Sbjct: 627 QNVISDSEAEKEANDAERDEDSECDDADDDPDGDDVNID 665
>09_04_0112 - 14757947-14758972
Length = 341
Score = 27.1 bits (57), Expect = 6.8
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = -2
Query: 378 RCSALSCTDRQD*FHRQEHRVTHSGSRRHELSQPPGIVSRPGYPPCRSRGAPTRRCP 208
RC+A C HR HR GS PP ++ P PP R P R P
Sbjct: 78 RCAACGC-------HRNFHRRLPEGSPPPP--PPPALLPAPPMPPHRGEETPEVRLP 125
>04_03_0870 +
20431215-20431419,20432559-20433439,20433829-20433990,
20434742-20435001,20435110-20435200,20435487-20435675
Length = 595
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/68 (25%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +2
Query: 11 LGGRWQEFLQNHAYKPGGQDE-EAVSVDPXXXXXXXXXXXXPKTSSTPSALTYDDYRAAD 187
L G+W L++ KPG E + A+ YD R
Sbjct: 388 LRGKWPVILKDRVVKPGEHVEVTGLQTAQADVEVSFEVGSLEAAERLDPAMAYDAQRLCS 447
Query: 188 VRGASPRG 211
RGA RG
Sbjct: 448 ARGADARG 455
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 279 PPGIVSRPGYPPCRSR-----GAPTRRCPRGEAPRTSAAR*SS 166
PPG ++ G PP + GAP G AP SA SS
Sbjct: 91 PPGNLAGSGTPPAKGSGGDGGGAPANNSTSGGAPANSAVEQSS 133
>03_06_0742 +
35900505-35900519,35901230-35901281,35901647-35901772,
35902303-35902613,35902745-35902988,35903726-35903976,
35904071-35904277,35904546-35904713,35904798-35905127,
35905266-35905400
Length = 612
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 443 WTLLDAVADSFPVLVDLTDTAGAAVHFHARIVKIDFIVRSI 321
W + FP L +D A A+ F + VK+D+ +S+
Sbjct: 170 WVYKKTSEEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSV 210
>02_02_0694 + 13013966-13014361
Length = 131
Score = 26.6 bits (56), Expect = 9.0
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = -2
Query: 372 SALSCTDRQD*FHRQEHRVTHSGSRRHELSQPPGIVSRPGYPPCRSRGAPTRRCPRGEAP 193
S+L+ TDR HR H G R P + PG G R P G P
Sbjct: 69 SSLTTTDRHHHHHRHHGHHHHRGHDRWNRKGVPPTAAGPGEEVDPRFGVQKRLVPTGPNP 128
>02_01_0419 - 3071796-3072502,3073198-3073432
Length = 313
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 309 SGSRRHELSQPPGIVSRP 256
SG RR SQP G+V RP
Sbjct: 15 SGDRRRPRSQPGGVVKRP 32
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -2
Query: 279 PPGIVSRPGYPPCRSRGAPTRRCPRGEAPRTSAAR 175
PP P YPP + G P E PR + +
Sbjct: 3 PPSPPPPPPYPPAAAEGGPAADSQAAELPRLTVTQ 37
>01_06_0613 +
30615335-30615980,30616072-30616231,30616350-30616398,
30617561-30617674,30617975-30618031,30618227-30618337
Length = 378
Score = 26.6 bits (56), Expect = 9.0
Identities = 24/87 (27%), Positives = 36/87 (41%)
Frame = +1
Query: 178 SGRRPRGFPAGTSPSRSTSRTAWRIAWTRDDSRRLRELVSPRS*MSHAMLLTMKSILTIR 357
+G PR G+SP S R++ DD L E+ +L +++
Sbjct: 15 AGTTPRSLSTGSSPRGSDDRSS-------DDGEELVEVTLDLQDDDTIVLRSVEPAAAAA 67
Query: 358 A*KCTAAPAVSVRSTSTGKLSATASRS 438
A A A S R TG S+++SRS
Sbjct: 68 AGVGAGAGAASARGELTGGPSSSSSRS 94
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,577,890
Number of Sequences: 37544
Number of extensions: 263246
Number of successful extensions: 1048
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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