Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_A11
(560 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 24 0.78
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 1.4
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 23 2.4
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 23 2.4
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 4.1
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 4.1
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 4.1
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 5.5
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 5.5
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 5.5
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 5.5
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 7.2
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 24.2 bits (50), Expect = 0.78
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 415 IQPCICTREIKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPC 549
++P CT + + GS G+ G+P A S+ PC
Sbjct: 139 VRPAACTPDSRVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNNPC 183
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 535 VRCSSSGSTVWRNSTGTG 482
VRC +GST R +TG G
Sbjct: 918 VRCVCAGSTGTRRATGCG 935
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = -1
Query: 482 LP*VTPSLPQTCLISRVQIHGCISATLTSWHSPR 381
+P P P I I +T WHSPR
Sbjct: 42 IPATAPQKPDKWEDVMADIERVIMPGVTHWHSPR 75
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 316 TYPNKCSLECSRPLAPSLE 372
T P K ++ RPLAP+ E
Sbjct: 37 TQPTKTVIQSKRPLAPAPE 55
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 174 LPQPVPLVLREGQDAQR 224
LP+P PLV ++G + +R
Sbjct: 236 LPKPTPLVPQQGFNMER 252
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 114 QRCCGVYLRSGDQKYT*YIHFMLLFMAQNP 25
+R V L + DQK +H L+ + +NP
Sbjct: 346 ERLLNVNLSAVDQKTRQEVHMFLMAIEKNP 375
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 114 QRCCGVYLRSGDQKYT*YIHFMLLFMAQNP 25
+R V L + DQK +H L+ + +NP
Sbjct: 346 ERLLNVNLSAVDQKTRQEVHMFLMAIEKNP 375
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +1
Query: 439 EIKQVCGSDGVTYGNPCLLNCATQSNPSLSI 531
+I+ + V GN L C NP+ I
Sbjct: 415 QIRHAFNEETVQPGNSVFLKCIASGNPTPEI 445
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.4 bits (43), Expect = 5.5
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -2
Query: 346 NTPVNIY*GKCSRLCHRPGHI*RYRRKDRLPHTYPLSRFSNRCASCPSR 200
N+PV+ G L G+ P +PLS + C+ C R
Sbjct: 44 NSPVSFSMGGHGSLLSPSGNTPNKSSTSPYPPNHPLSGSKHLCSICGDR 92
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.4 bits (43), Expect = 5.5
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +3
Query: 291 PGLWHRREHLP 323
P +WH H+P
Sbjct: 47 PQMWHHHSHMP 57
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.4 bits (43), Expect = 5.5
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +3
Query: 291 PGLWHRREHLP 323
P +WH H+P
Sbjct: 47 PQMWHHHSHMP 57
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.0 bits (42), Expect = 7.2
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 143 KFLAHAHDDG 114
KF++H H+DG
Sbjct: 230 KFMSHIHNDG 239
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,708
Number of Sequences: 336
Number of extensions: 2953
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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