Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_A09
(590 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 34 0.082
At5g43990.2 68418.m05382 SET domain-containing protein identical... 31 0.57
At5g43990.1 68418.m05383 SET domain-containing protein identical... 31 0.57
At3g54790.1 68416.m06063 armadillo/beta-catenin repeat family pr... 31 0.76
At5g16910.1 68418.m01982 cellulose synthase family protein simil... 30 1.3
At4g28570.1 68417.m04087 alcohol oxidase-related low similarity ... 29 1.8
At5g51180.2 68418.m06346 expressed protein 29 2.3
At5g51180.1 68418.m06345 expressed protein 29 2.3
At5g40480.1 68418.m04909 expressed protein ; expression supporte... 28 4.1
At3g57030.1 68416.m06348 strictosidine synthase family protein s... 28 5.4
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 27 7.1
At4g11130.1 68417.m01805 RNA-dependent RNA polymerase, putative ... 27 7.1
At4g04530.1 68417.m00660 Ulp1 protease family protein (snoR29) c... 27 7.1
At5g64360.3 68418.m08085 DNAJ heat shock N-terminal domain-conta... 27 9.4
At5g64360.2 68418.m08084 DNAJ heat shock N-terminal domain-conta... 27 9.4
At5g64360.1 68418.m08083 DNAJ heat shock N-terminal domain-conta... 27 9.4
At5g52140.1 68418.m06472 zinc finger protein-related 27 9.4
At3g46660.1 68416.m05065 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.4
At2g20810.1 68415.m02448 glycosyl transferase family 8 protein c... 27 9.4
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 33.9 bits (74), Expect = 0.082
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 49 ASTAGTCSLKSLATTSNSMMISRSSGATPGCAGKRVLS-LSTLTVP 183
AS+ + +++ LAT S+ +SRS+G+ G + RVL LS+LT P
Sbjct: 3290 ASSLSSSTVRELATLSSKQKMSRSTGSMAGASILRVLQVLSSLTSP 3335
>At5g43990.2 68418.m05382 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 740
Score = 31.1 bits (67), Expect = 0.57
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 129 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAGLAYDN 308
N V +AG +DGT+ I + +HKL+A +++ ++L ++ +G N
Sbjct: 220 NGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAA--TIEEPPALELASSASGEVKIN 277
Query: 309 VNGHGAT-LTNTHIP 350
++ AT +N H+P
Sbjct: 278 LSFAPATGGSNPHLP 292
>At5g43990.1 68418.m05383 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 717
Score = 31.1 bits (67), Expect = 0.57
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 129 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAGLAYDN 308
N V +AG +DGT+ I + +HKL+A +++ ++L ++ +G N
Sbjct: 197 NGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAA--TIEEPPALELASSASGEVKIN 254
Query: 309 VNGHGAT-LTNTHIP 350
++ AT +N H+P
Sbjct: 255 LSFAPATGGSNPHLP 269
>At3g54790.1 68416.m06063 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 760
Score = 30.7 bits (66), Expect = 0.76
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1
Query: 491 SATNSVEIGNLRNAGHVLSSESLCAEVMVIIVEQVDFASGGQLVTETRDVSVCKSRSVSI 312
++ +S+E GN + S SLC E +E + S GQ T +R SVC S S+
Sbjct: 353 TSRSSLETGNGFEKLKINVSASLCGESQSKDLEIFELLSPGQSYTHSRSESVCSVVS-SV 411
Query: 311 DIV 303
D V
Sbjct: 412 DYV 414
>At5g16910.1 68418.m01982 cellulose synthase family protein similar
to gi:2827143 cellulose synthase catalytic subunit,
Arabidopsis thaliana, gi:9622886 cellulose synthase-7
from Zea mays
Length = 1145
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = -2
Query: 448 GMFLVAKAFALRSWSSLWNRLTLPAAVSLSPKPGM*VFVRVAPCPLTLSYANPAVAAPNF 269
GM + A+ R W L +L +PA V +SP + +F+R+ L L++ P+
Sbjct: 266 GMGMEAQDLMSRPWRPLTRKLKIPAGV-ISPY-RLLIFIRIVVLALFLTW-RVKHQNPDA 322
Query: 268 IWLVRSTEPRALSLWFSL 215
+WL + LWF+L
Sbjct: 323 VWLWGMSV--VCELWFAL 338
>At4g28570.1 68417.m04087 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 748
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 497 VQSATNSVEIGNLRNAGHVLSSESLCAEVMVIIVEQVDFASG 372
V A +VE+G R+ G + E++ E M +++VD G
Sbjct: 623 VSVAAGAVEVGTYRSDGQKMKCEAITKEAMEEFLDEVDAVGG 664
>At5g51180.2 68418.m06346 expressed protein
Length = 357
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 338 VCKSRSV--SIDIVVCQSSCSGSQLHLVSEING 246
+CK+ SV S+D+ CQ+S S S HLV ++G
Sbjct: 10 LCKAESVDGSLDVWSCQNSDSSSADHLVVMVHG 42
>At5g51180.1 68418.m06345 expressed protein
Length = 357
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 338 VCKSRSV--SIDIVVCQSSCSGSQLHLVSEING 246
+CK+ SV S+D+ CQ+S S S HLV ++G
Sbjct: 10 LCKAESVDGSLDVWSCQNSDSSSADHLVVMVHG 42
>At5g40480.1 68418.m04909 expressed protein ; expression supported by
MPSS
Length = 1919
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 309 VNGHGATLTNTHIPGFGDKLTAAGKVNLFHNDDH 410
V+ G TLTN H+P G K + N F +H
Sbjct: 1610 VDSPGETLTNVHVPAEGYKFPVKFRENKFAVTEH 1643
>At3g57030.1 68416.m06348 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]
Length = 374
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -2
Query: 307 LSYANPAVAAPN--FIWLVRSTEPRALSLWFSLPVIGTLTIAPEVP 176
L++AN + + F+ +V +T + L LW S P GT + E+P
Sbjct: 218 LAFANGVALSKDRSFVLVVETTTCKILRLWLSGPNAGTHQVFAELP 263
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 368 QLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQLHLVSEING-AKSTELVVF 219
++ ET + +R+ S+D+V S SG Q + ++NG ++L +F
Sbjct: 568 EIYNETIRDLLSTNRTTSMDLVRADSGTSGKQYTITHDVNGHTHVSDLTIF 618
>At4g11130.1 68417.m01805 RNA-dependent RNA polymerase, putative
similar to RNA-directed RNA polymerase [Lycopersicon
esculentum] gi|4038592|emb|CAA71421
Length = 1133
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 453 IPQVPDFNTVGGGLDYMFKDKIGASATA 536
+ Q+PD G DY F D IG + A
Sbjct: 536 VEQIPDIEVTTDGADYCFSDGIGKISLA 563
>At4g04530.1 68417.m00660 Ulp1 protease family protein (snoR29)
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain; snoR29 gene for small
nucleolar RNA GI:15706258
Length = 917
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 372 AAGKVNLFHNDDHDLSAKAFATKNM--PSIPQVPDFN 476
A V+ +DD LSAK+ A ++ P IP++P+FN
Sbjct: 20 ARRSVSFEDDDDPFLSAKSTAEQSSDPPIIPRIPEFN 56
>At5g64360.3 68418.m08085 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 253 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 131
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g64360.2 68418.m08084 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 253 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 131
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g64360.1 68418.m08083 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 422
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 253 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 131
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g52140.1 68418.m06472 zinc finger protein-related
Length = 277
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -1
Query: 386 DFASGGQLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQLH 267
D+A G ++ + ++ S+C +++++I + +C S LH
Sbjct: 29 DYAIGREIQQQYQNKSICNDAAIALEIQKEEEACVHSCLH 68
>At3g46660.1 68416.m05065 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 458
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 461 SSRFQHCWWRIGLHVQGQ-DWCISDRRTHRL 550
++R+ C W+IG+ V+G+ D + +R RL
Sbjct: 384 NARYLECVWKIGIQVEGELDRGVVERAVKRL 414
>At2g20810.1 68415.m02448 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 536
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 311 DIVVCQSSCSGSQLHLVSEINGAKSTELVVFVASYRYLDYS 189
D+VV + S + L +NGA T + F ++YL+YS
Sbjct: 365 DVVVQKDLSSLFSIDLNKNVNGAVETCMETFHRYHKYLNYS 405
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,448,251
Number of Sequences: 28952
Number of extensions: 284968
Number of successful extensions: 826
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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