Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A08
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.7  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   6.2  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/34 (20%), Positives = 21/34 (61%)
 Frame = -3

Query: 387 IDVIF*VTFDIRTAFRIWLLGVYLCDVAMFVICS 286
           + ++   T D+R +  I+L+ + + D+ + ++C+
Sbjct: 89  VPIVIFKTKDMRNSTNIFLVNLSVADLMVLLVCT 122


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/34 (20%), Positives = 21/34 (61%)
 Frame = -3

Query: 387 IDVIF*VTFDIRTAFRIWLLGVYLCDVAMFVICS 286
           + ++   T D+R +  I+L+ + + D+ + ++C+
Sbjct: 89  VPIVIFKTKDMRNSTNIFLVNLSVADLMVLLVCT 122


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = -2

Query: 583 CKYYFLKVFRLLIIHTECCNIISKHKLSLFSITFY*LFHCFY 458
           C YYF   F +  +H      I    + LF +     F+C +
Sbjct: 112 CVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAF 153


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 286 ATNDEHCHVTEIDPKKPYPECCP 354
           +T DE C VT +     YP C P
Sbjct: 36  STTDE-CQVTPVIHVLQYPGCVP 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,730
Number of Sequences: 336
Number of extensions: 3382
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)