Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A04
         (443 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14708| Best HMM Match : IF-2B (HMM E-Value=0)                       88   3e-18
SB_44610| Best HMM Match : PI3Ka (HMM E-Value=6.1e-32)                 31   0.32 
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.7  
SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.3  
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)              27   7.0  

>SB_14708| Best HMM Match : IF-2B (HMM E-Value=0)
          Length = 350

 Score = 88.2 bits (209), Expect = 3e-18
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = +3

Query: 75  MSLESIKYRRGSXXXXXXXXXXXQTRYVKVQGVEDGWRVINKMQVRGAPAIAIVGCLSLA 254
           MSLE+IKY++G            ++ Y  V   EDGW+ I +M+VRGAPAIAIVG LSLA
Sbjct: 1   MSLEAIKYKKGRLEILNQLLLPHESTYEVVSDTEDGWKAIREMKVRGAPAIAIVGALSLA 60

Query: 255 IELLKDNIADKKIMRQEIEGKLNYLVSARPTAVNI 359
            E+     A  + + + ++ KL YL +ARPTAVN+
Sbjct: 61  AEIYSKPFASSEELAEFVKQKLQYLNTARPTAVNM 95


>SB_44610| Best HMM Match : PI3Ka (HMM E-Value=6.1e-32)
          Length = 773

 Score = 31.5 bits (68), Expect = 0.32
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = -2

Query: 268 FSNSIARDKQPTIAIAGAPLTCILFMTLHPSSTPCTLTYLVCKGRSNWSSISKLPLRY 95
           +S+ +  + +  I  +   +TC ++    P S P   +Y     R NW+   KLP++Y
Sbjct: 14  YSSDVDDNLEIKIECSDLYVTCTIYADDRPLSLPTGTSYRPFSTRWNWNEWLKLPIKY 71


>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4232

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 233  YSNCWCTSNLHFVYDSPSIFNTLHFN 156
            +  C+  ++L  VY +PSI  T+HFN
Sbjct: 2435 FYQCFAENSLKTVYSTPSIHLTVHFN 2460


>SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 581

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 144 QTRYVKVQGVEDGWRVINKMQVRGAPAIAIVGCLSLAIELLKDNIADKKIMRQEIEGKL 320
           +T+++ +  V  G   +NK++ R + A  I     L + +L +  A + I RQ+  G++
Sbjct: 411 RTKFINITSVNPGTSSVNKVRYRLSCAKKIDSSQLLYVWILSECTATELITRQQYGGEV 469


>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
          Length = 603

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 154 YLVCKGRSNWSSISKLPLRYLID 86
           Y VC+ R NW   + + LRY +D
Sbjct: 305 YCVCRNRHNWDIGASMLLRYPLD 327


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,525,917
Number of Sequences: 59808
Number of extensions: 201127
Number of successful extensions: 342
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 871599479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)