Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A04
         (443 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...   103   2e-24
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   6.4  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    22   8.5  

>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score =  103 bits (248), Expect = 2e-24
 Identities = 51/122 (41%), Positives = 72/122 (59%)
 Frame = +3

Query: 75  MSLESIKYRRGSXXXXXXXXXXXQTRYVKVQGVEDGWRVINKMQVRGAPAIAIVGCLSLA 254
           M+LE+IKY+ G            +++Y+ V GV+DGW  I+KMQVRGAPAIAIVGCLSL 
Sbjct: 1   MTLEAIKYKSGQLQILDQLLLPAESKYIPVAGVKDGWSAIHKMQVRGAPAIAIVGCLSLV 60

Query: 255 IELLKDNIADKKIMRQEIEGKLNYLVSARPTAVNIKXXXXXXXXXXXXXCADDSVSHEEF 434
           +E+       K  +  EI   L YLV++RPTAVN+K              A+++V+ +  
Sbjct: 61  VEIYDKQYETKAALANEIGEHLQYLVTSRPTAVNLKLAADDVKGQVESLLANETVTVDGM 120

Query: 435 KE 440
           K+
Sbjct: 121 KQ 122


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = -1

Query: 230 SNCWCTSNLHFVYD-SPSIFN 171
           ++CWC SN     D  P +FN
Sbjct: 237 ASCWCNSNPTQCPDLKPGVFN 257


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 53  KPDIVIYNH*KTTYERR 3
           KPDIV++N+    YE R
Sbjct: 110 KPDIVLFNNADGNYEVR 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,177
Number of Sequences: 2352
Number of extensions: 7050
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)