SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A04
         (443 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001703-1|AAH01703.1|  369|Homo sapiens hypothetical protein MG...    83   6e-16
AY358176-1|AAQ88543.1|  369|Homo sapiens TLEA6390 protein.             83   6e-16
Z46973-1|CAA87094.1|  887|Homo sapiens phosphatidylinositol 3-ki...    32   0.78 
AL109839-6|CAI95635.1|  134|Homo sapiens chromosome 20 open read...    30   3.1  
BC053651-1|AAH53651.1|  887|Homo sapiens phosphoinositide-3-kina...    30   4.1  
BC033004-1|AAH33004.1|  887|Homo sapiens phosphoinositide-3-kina...    30   4.1  

>BC001703-1|AAH01703.1|  369|Homo sapiens hypothetical protein
           MGC3207 protein.
          Length = 369

 Score = 82.6 bits (195), Expect = 6e-16
 Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
 Frame = +3

Query: 75  MSLESIKYRRGSXXXXXXXXXXXQTRYVKVQGVEDGWRVINKMQVRGAPAIAIVGCLSLA 254
           M+LE+I+Y RGS           Q+RY  V  V   W  I  M+VRGAPAIA+VGCLSLA
Sbjct: 1   MTLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLA 60

Query: 255 IELLKD-NIADKKIMRQEIEGKLNYLVSARPTAVNIKXXXXXXXXXXXXXCADDSVSHEE 431
           +EL           +   +  KL++LV+ARPTAVN+                 +  + E 
Sbjct: 61  VELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEA 120

Query: 432 FKER 443
            +ER
Sbjct: 121 VRER 124


>AY358176-1|AAQ88543.1|  369|Homo sapiens TLEA6390 protein.
          Length = 369

 Score = 82.6 bits (195), Expect = 6e-16
 Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
 Frame = +3

Query: 75  MSLESIKYRRGSXXXXXXXXXXXQTRYVKVQGVEDGWRVINKMQVRGAPAIAIVGCLSLA 254
           M+LE+I+Y RGS           Q+RY  V  V   W  I  M+VRGAPAIA+VGCLSLA
Sbjct: 1   MTLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLA 60

Query: 255 IELLKD-NIADKKIMRQEIEGKLNYLVSARPTAVNIKXXXXXXXXXXXXXCADDSVSHEE 431
           +EL           +   +  KL++LV+ARPTAVN+                 +  + E 
Sbjct: 61  VELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEA 120

Query: 432 FKER 443
            +ER
Sbjct: 121 VRER 124


>Z46973-1|CAA87094.1|  887|Homo sapiens phosphatidylinositol
           3-kinase protein.
          Length = 887

 Score = 32.3 bits (70), Expect = 0.78
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 211 LTCILFMTLHPSSTPCTLTYLVCKGRSNWSSISKLPLRY 95
           +TC +F    PS+ P   +Y     R NW+   KLP++Y
Sbjct: 59  VTCQVFAEGKPSALPVRTSYKAFSTRWNWNEWLKLPVKY 97


>AL109839-6|CAI95635.1|  134|Homo sapiens chromosome 20 open reading
           frame 119 protein.
          Length = 134

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -2

Query: 271 SFSNSIARDKQPTIAIAGA-PLTCILFMT--LHPSSTPCTLTYLVCKGRSNWSSISKLPL 101
           S ++S  R ++P + I G  PLT  +     LH         YLV K  S+W  +S LPL
Sbjct: 5   SAAHSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGTCYLVLKRWSDWMVLSFLPL 64


>BC053651-1|AAH53651.1|  887|Homo sapiens phosphoinositide-3-kinase,
           class 3 protein.
          Length = 887

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 211 LTCILFMTLHPSSTPCTLTYLVCKGRSNWSSISKLPLRY 95
           +TC +F    P + P   +Y     R NW+   KLP++Y
Sbjct: 59  VTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKY 97


>BC033004-1|AAH33004.1|  887|Homo sapiens phosphoinositide-3-kinase,
           class 3 protein.
          Length = 887

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 211 LTCILFMTLHPSSTPCTLTYLVCKGRSNWSSISKLPLRY 95
           +TC +F    P + P   +Y     R NW+   KLP++Y
Sbjct: 59  VTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKY 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,117,472
Number of Sequences: 237096
Number of extensions: 905147
Number of successful extensions: 5081
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5079
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -