Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A03
         (625 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51925| Best HMM Match : DIX (HMM E-Value=0.75)                      31   0.57 
SB_24482| Best HMM Match : KID (HMM E-Value=0.045)                     31   1.0  
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)              30   1.3  
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)        29   3.1  
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)                   29   3.1  
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)                   28   5.4  
SB_7129| Best HMM Match : E-MAP-115 (HMM E-Value=0.066)                28   7.1  
SB_48356| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_52889| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)                  27   9.4  
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)                      27   9.4  
SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)                  27   9.4  
SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015)          27   9.4  

>SB_51925| Best HMM Match : DIX (HMM E-Value=0.75)
          Length = 256

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +1

Query: 184 LKVLQERQERKCARLEQAVQEEEKLYEAKLTEIMDQHMHCVGVFSSLD 327
           +KVL+ + ++ C RLE+   EEE+L+E KL    +Q    + + S ++
Sbjct: 1   MKVLKFQNKKLCERLEEMKAEEERLHE-KLNSAKEQRTSDLEILSVIN 47


>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
          Length = 1714

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +1

Query: 67   DPDEFVERMVRRSMQESRLKDDQ-FDPEMIHDIFTQAIQDLKVLQERQERKCARLEQAVQ 243
            D +   +R+  ++ Q S +K+++    + +   F +  ++ K+L+E +ER  A  +  ++
Sbjct: 1641 DKEALEKRLKSKNQQLSIIKEEEDAGKKQLEVAFCKLEKERKLLKEEEERLAASYKDKIK 1700

Query: 244  EEEKLYEAKLTEI 282
            + E+  E + TEI
Sbjct: 1701 DLERRLERRGTEI 1713


>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
          Length = 2858

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/66 (25%), Positives = 37/66 (56%)
 Frame = +1

Query: 85   ERMVRRSMQESRLKDDQFDPEMIHDIFTQAIQDLKVLQERQERKCARLEQAVQEEEKLYE 264
            + +V R + E + K D ++ E+  +   + I+DLK+ ++  ER+   L++ ++  E  YE
Sbjct: 1459 KNIVERDLNELKSKIDYYNQEI--ESRDKTIEDLKLKRDELERQMDALKKDMRRVEADYE 1516

Query: 265  AKLTEI 282
              + +I
Sbjct: 1517 TAIQKI 1522


>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
          Length = 1128

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/53 (22%), Positives = 30/53 (56%)
 Frame = +1

Query: 172 AIQDLKVLQERQERKCARLEQAVQEEEKLYEAKLTEIMDQHMHCVGVFSSLDE 330
           A+  L+  Q++ +++C   E  +++  ++ E K ++I +Q M  + +   +DE
Sbjct: 831 AVDSLQKEQKKLQKRCEDREDEIRQLRQIIEDKESDIEEQVMELIHLRDQIDE 883


>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
          Length = 1249

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 21/76 (27%), Positives = 38/76 (50%)
 Frame = +1

Query: 43  QRIRTDPFDPDEFVERMVRRSMQESRLKDDQFDPEMIHDIFTQAIQDLKVLQERQERKCA 222
           +RIR +        E  +R+  +E+RL   +   E       + +++ +  QER+E++ A
Sbjct: 184 RRIREEEERQKALKEERMRKLQEEARLAAQRALEEK------RKLEEERKEQERKEKELA 237

Query: 223 RLEQAVQEEEKLYEAK 270
            LE+  QEE +  E K
Sbjct: 238 ELEKKRQEERRRQEEK 253


>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
          Length = 5087

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +1

Query: 178  QDLKVLQERQERKCARLEQAVQEEEKLYEAKLTEIMDQHM 297
            Q +++LQE  ER+ AR+EQ  Q EE++  A  TE    +M
Sbjct: 4808 QKIQLLQEVLERQKARIEQ--QSEEEVVPAPPTEAEGDNM 4845


>SB_7129| Best HMM Match : E-MAP-115 (HMM E-Value=0.066)
          Length = 432

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/71 (23%), Positives = 35/71 (49%)
 Frame = +1

Query: 58  DPFDPDEFVERMVRRSMQESRLKDDQFDPEMIHDIFTQAIQDLKVLQERQERKCARLEQA 237
           D F    + E +V R + +  ++  Q+   ++H + +  ++     QE  ER   RLE  
Sbjct: 213 DSFTTRNWNEIIVFRVIPQQPIEKFQWAARVVHVLVSSCMRWRSSDQEETERDWVRLENL 272

Query: 238 VQEEEKLYEAK 270
            +EE++  ++K
Sbjct: 273 QREEQERRKSK 283


>SB_48356| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 235

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 154 VSFQDQIDHPLIVILACFVSPFVLQTRLGQRGLF*FFASCRNSCSPG 14
           V  +D++   +++I+   V   VL   +  R +   ++S  NSCSPG
Sbjct: 72  VDNEDRVVMMMMMIMMTMVMTMVLMMTMVSRNIPDHYSSPSNSCSPG 118


>SB_52889| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
          Length = 623

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 124 LIVILACFVSPFVLQTRLGQRGLF*FF 44
           L+VILAC + PF L       GLF  F
Sbjct: 251 LVVILACLILPFFLPIIRNYAGLFLLF 277


>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2839

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = +1

Query: 88  RMVRRSMQESRLKDDQF-----DPEMIHDIFTQAIQDLKVLQERQERKCARLEQAVQEEE 252
           R+     +E R+K++       D   + +I  QA + LK  QE++E     LE+ ++EE+
Sbjct: 327 RLALYRQREQRIKEEAQRRILEDRREVEEIEQQAAEQLKGQQEKEEELKRLLERQLEEEK 386

Query: 253 KLYE 264
           +  E
Sbjct: 387 EKKE 390


>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
          Length = 1936

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 73   DEFVERMVRRSMQE-SRLKDDQFDPEMIHDIFTQAIQDLKVLQERQERKCARLE-QAVQE 246
            +E   R+   S +E   L DDQ   E+      Q  Q LK   ERQE++    E QA+ E
Sbjct: 1176 EEEKRRLEEMSEEEYDALTDDQ-KAEVDRKHLEQKKQRLKREMERQEKERKEKEMQALLE 1234

Query: 247  EEKLYEAK 270
            E++L E K
Sbjct: 1235 EKRLEEEK 1242


>SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
          Length = 578

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 124 LIVILACFVSPFVLQTRLGQRGLF*FF 44
           L+VILAC + PF L       GLF  F
Sbjct: 308 LVVILACLILPFFLPIIRNYAGLFLLF 334


>SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015)
          Length = 1052

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = -1

Query: 181  PVLPV*ICHVSFQDQIDHPLIVILACFVSPFVLQTRLGQRGL 56
            P LPV  CH   Q Q DH   + +  FV      TR    GL
Sbjct: 1009 PPLPVEHCHCHKQCQQDHICAIGIMSFVEALAPNTRKRYEGL 1050


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,603,737
Number of Sequences: 59808
Number of extensions: 319598
Number of successful extensions: 875
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)