Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_A02
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    40   0.001
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    40   0.001
L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p...    40   0.001
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    30   1.3  
U58761-7|AAB00717.1|  481|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z69661-3|CAA93490.1|  293|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z82053-5|CAB04833.1|  103|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z12017-6|CAE47469.1|  734|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF078157-8|AAG24076.1|  409|Caenorhabditis elegans Hypothetical ...    27   9.2  
AC084155-4|AAG23365.1|  410|Caenorhabditis elegans Hypothetical ...    27   9.2  
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical...    27   9.2  

>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +2

Query: 431 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYF 544
           K +VF+LD SGS+ G  M  +K  M  IL+ L+P DYF
Sbjct: 233 KDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYF 270


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +2

Query: 431 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYF 544
           K +VF+LD SGS+ G  M  +K  M  IL+ L+P DYF
Sbjct: 233 KDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYF 270


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +2

Query: 431 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYF 544
           K +VF+LD SGS+ G  M  +K  M  IL+ L+P DYF
Sbjct: 233 KDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYF 270


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +2

Query: 431 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYF 544
           K +VF+LD SGS+ G  M  +K  M  IL+ L+P DYF
Sbjct: 233 KDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYF 270


>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
           protein 36 protein.
          Length = 1249

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = +2

Query: 428 NKYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 559
           +K V+ +LD SGSM G++ E  K+    IL  L+  DYF+I+ F
Sbjct: 248 SKNVLIMLDMSGSMLGQRYEVAKQTTEAILETLSHNDYFNIMTF 291


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
 Frame = +2

Query: 128  EIRTGNEVDATKDDAQMSNVIIQREGT----SAVITFSPDLEEQKRLMHVYAEKSKESAT 295
            EI T  + D    D +M N++ + +G     ++V   +  + E++     Y E+ +  + 
Sbjct: 2342 EIDTIFQRDGLAFDGEMENLLRRLQGDHWRGNSVQRGAGQVAEEEEGSETYEERERSDSP 2401

Query: 296  GENAGEGVLGQFVVQYDVDRPKDGQILVNDGYFVHFFAPDLPP 424
             E++     G   V+ D     DG++ + D       APD PP
Sbjct: 2402 SESSEHA--GDEEVRDDAVETGDGEVDMADAQDAPLAAPDAPP 2442


>U58761-7|AAB00717.1|  481|Caenorhabditis elegans Hypothetical
           protein C01F1.1 protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 239 EEQKRLMHVYAEKSKESATGENAGEG 316
           E+QKRL+ +  E S + + G++ GEG
Sbjct: 203 EQQKRLLKIKDEASSDDSDGDDEGEG 228


>Z69661-3|CAA93490.1|  293|Caenorhabditis elegans Hypothetical
           protein F48F7.5 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
 Frame = +2

Query: 53  GSLVPKFTVTVHIKE--TANISEL---RVPEIRTGNEVDATKDDAQMSNVIIQREGTSAV 217
           G+L  ++ +  HI +  T  +S+     VP I +GNEV    DD+  +  + +RE  S  
Sbjct: 142 GTLFQQYVLDEHIIKIKTGRLSKPATEEVPNIESGNEVRELIDDS-FNRYLRKRELDSTT 200

Query: 218 ITFSPDLEEQKRLMHVYAEKSKESATGENAGEGVLGQFVVQYDVDRPKDGQILVND 385
           +     L  ++R   V  E   E A  +N GE      +   DVD  ++ + L+++
Sbjct: 201 VDVGYSLPNKRR--RVEEEDEDEEADDDN-GEST---DLEGSDVDENREEKELIDE 250


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +2

Query: 137 TGNEVDATKDDAQMSNVI---IQREGTSAVITFSPDLEEQKRLMHVYAEKSK---ESATG 298
           +GN  +  +   ++ +++   I  +  SA +    D++E+KR M  +AEK +   E A  
Sbjct: 637 SGNATEVKEKKKELPSIVRLRITNKYPSAFVPNKYDVQEEKRRMEAFAEKERLASERAAV 696

Query: 299 EN 304
           EN
Sbjct: 697 EN 698


>Z82053-5|CAB04833.1|  103|Caenorhabditis elegans Hypothetical
           protein T26E3.6 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +1

Query: 181 KRYHSKRRHLCGHYV---LARFRRAKTIDARICGEIERICYRGKC 306
           K Y      LCGHYV   L+ FR+    D R CG  E  C  G C
Sbjct: 23  KDYECSGTDLCGHYVCTPLSEFRKCPE-DKR-CG-FEYSCMSGVC 64


>Z12017-6|CAE47469.1|  734|Caenorhabditis elegans Hypothetical
           protein R08D7.6b protein.
          Length = 734

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +1

Query: 295 RGKCGRRCFRSI--C-CTI*CRSTERWTNSSERWI 390
           R K  R CF+++  C C   C S  R+  SS RWI
Sbjct: 700 RPKSCRNCFKTVRACICKRKCSSNTRYFGSSFRWI 734


>AF078157-8|AAG24076.1|  409|Caenorhabditis elegans Hypothetical
           protein F25E5.5 protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 268 CGEIERICYRGKC 306
           CG+ ER+C RG+C
Sbjct: 352 CGDFERVCGRGQC 364


>AC084155-4|AAG23365.1|  410|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.3 protein.
          Length = 410

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 259 ARICGEIERICYRGKC 306
           A  CG+ ER+C RG C
Sbjct: 351 AGFCGDFERVCGRGDC 366


>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
            protein Y47G6A.17 protein.
          Length = 1736

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
 Frame = +2

Query: 89   IKETANISELRVPEIRTGNEVDATKDDAQM----SNVIIQREGTSAVITFSPDLEEQK-- 250
            +KE +    LR+  +RT NEV +  D  +M    +N + +R+   A  T S    + K  
Sbjct: 970  LKEESETEMLRIRALRTANEVLSNFDGHEMQPQGNNEVAERQLQLAYFTSSQQSAKAKQF 1029

Query: 251  -RLMHVYAEKSKE 286
             R++H+  ++  E
Sbjct: 1030 ERMVHLKEQRVAE 1042


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,832,933
Number of Sequences: 27780
Number of extensions: 269468
Number of successful extensions: 808
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)