Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_P19
         (309 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    64   4e-13
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    56   1e-10
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    33   5e-04
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    29   0.008
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    29   0.011
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    25   0.18 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   0.73 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   1.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   3.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   3.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   9.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   9.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    19   9.0  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 63.7 bits (148), Expect = 4e-13
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +1

Query: 118 SQSKVLCYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQADTF*MVSLHENLDL 297
           ++SKV+CYYDSKS+ R+ QA+   TDLEP L   TH +Y    I  +T+ +  L+E  D+
Sbjct: 22  AESKVVCYYDSKSHFRQGQAKFEITDLEPALQYCTHLIYGYAAIDEETYKLTPLNEQFDV 81


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 55.6 bits (128), Expect = 1e-10
 Identities = 24/63 (38%), Positives = 38/63 (60%)
 Frame = +1

Query: 115 SSQSKVLCYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQADTF*MVSLHENLD 294
           ++ +KV+CYY+SK+Y R+ Q +     ++P L   TH +Y   GI A+TF    L+E  D
Sbjct: 16  AADNKVVCYYNSKAYFRDGQGKFDVNFIDPALQFCTHLIYGYAGINAETFKAQPLNELFD 75

Query: 295 LDR 303
           + R
Sbjct: 76  VTR 78


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 33.5 bits (73), Expect = 5e-04
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = +1

Query: 115 SSQSKVLCYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQADTF*MVSLHENLD 294
           ++  KV+CY+ + S  R    R     ++P L   TH +Y   G+QAD   +  L E LD
Sbjct: 21  ATTDKVVCYWGTWSTYRWGNGRFTVDHIDPYLC--THIIYSFVGLQADGN-VRHLDEYLD 77

Query: 295 LD 300
           +D
Sbjct: 78  VD 79


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 29.5 bits (63), Expect = 0.008
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +1

Query: 112 PSSQSKVLCYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQADTF*MVSLHENL 291
           P    +V+CY  + +  R+        DL+P     TH +Y    I    F M+S  +  
Sbjct: 171 PREDDRVVCYVQAAARYRKEPLAFSPEDLDP--FACTHVIYAFATIDPHNFNMISNDDES 228

Query: 292 DL 297
           D+
Sbjct: 229 DI 230


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 0.011
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +1

Query: 115 SSQSKVLCYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQADTF*MVSLHEN 288
           ++  KV+CYY S    R    + +  D+ P L   TH  Y   G+  D    V   EN
Sbjct: 20  AATDKVICYYASWGAQRPGNGQFVPEDINPDLC--THINYAFVGLDKDCNIQVLDEEN 75


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 0.18
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +1

Query: 115 SSQSKVLCYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQAD 258
           ++  K++CYY S    R    +    D++  L   TH  Y   G+  D
Sbjct: 18  AASDKIICYYASWGANRPGNGKFTPEDIDANLC--THVNYAFLGLNDD 63


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 0.73
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 127 KVLCYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQ 252
           KV+CYY + S  R    +     + P L   TH ++  G ++
Sbjct: 88  KVVCYYTNWSQYRVKIGKFTPEHIIPDLC--THIIFAFGWLK 127



 Score = 22.6 bits (46), Expect = 0.97
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +2

Query: 83  RLRLPTTQHHLVAKAKSSATMTARAISENLKHVCWLRTWS 202
           R RL +   H   K  +S + T++   +  K VC+   WS
Sbjct: 60  RFRLRSRPGH--RKTDNSLSATSKKDKDGYKVVCYYTNWS 97



 Score = 21.0 bits (42), Expect = 3.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 195 LGAWSFGLDPF 227
           +G W+FG  PF
Sbjct: 596 IGGWAFGSTPF 606



 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 195 LGAWSFGLDPF 227
           +G WSFG   F
Sbjct: 167 IGGWSFGTQKF 177


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 218 GPIFCTNLAGFKLTPFKWFHSMRIWTLIGR 307
           G +  T LAG   TPFK  +  ++ T  G+
Sbjct: 91  GEVAVTVLAGILTTPFKLPYFWKMLTGFGK 120



 Score = 20.6 bits (41), Expect = 3.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 175 ARMLATDLEPGLSVWTHFLYQSGGIQADTF 264
           +R L T     L+ +   L+Q GGI  + +
Sbjct: 364 SRSLLTSFGGALTTFLVILFQYGGIHGNVY 393


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 4/13 (30%), Positives = 10/13 (76%)
 Frame = -2

Query: 242 PDWYRKWVQTERP 204
           P W+ +W+ +++P
Sbjct: 18  PTWFVRWLNSQQP 30


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +1

Query: 127 KVLCYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQAD 258
           K+LC++ S +  R  +      ++   L   TH  Y   G+ +D
Sbjct: 25  KILCFFASWAGYRNGEGSFKPQNINANLC--THVHYAFLGVNSD 66


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/43 (20%), Positives = 19/43 (44%)
 Frame = +2

Query: 95   PTTQHHLVAKAKSSATMTARAISENLKHVCWLRTWSLVFRSGP 223
            PT+Q  +      + +  A+ +  NLK+  W+   + +    P
Sbjct: 1251 PTSQKIVPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQP 1293


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 214 PKDQAPSP 191
           P+D+APSP
Sbjct: 393 PRDKAPSP 400


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 152 RAISENLKHVCWLRTWSLVFRSGPI 226
           R +++N+ +   +  WSL+F  G I
Sbjct: 161 RLLADNVANFNKIFGWSLIFLFGRI 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,139
Number of Sequences: 336
Number of extensions: 1228
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)