Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_P19
         (309 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    31   0.16 
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    29   0.87 
U70850-4|AAB09125.3|  483|Caenorhabditis elegans Amino acid tran...    27   2.0  
Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical pr...    27   3.5  
Z48621-7|CAA88546.1|  770|Caenorhabditis elegans Hypothetical pr...    26   6.2  
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha...    26   6.2  
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha...    26   6.2  
AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical ...    26   6.2  
AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical ...    26   6.2  
Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical pr...    25   8.1  

>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 31.1 bits (67), Expect = 0.16
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 136 CYYDSKSYIRESQARMLATDLEPGLSVWTHFLYQSGGIQAD 258
           CY+ + +  R+ +A+ +  D  PGL   TH L+  G + AD
Sbjct: 57  CYFTNWAQYRQGRAKFVPEDYTPGLC--THILFAFGWMNAD 95


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
           protein K03H1.5 protein.
          Length = 1385

 Score = 28.7 bits (61), Expect = 0.87
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 189 YGLGAWSFGLDPFSVPIW 242
           Y +G  SFGL PFS P W
Sbjct: 161 YPMGMLSFGLPPFSAPPW 178


>U70850-4|AAB09125.3|  483|Caenorhabditis elegans Amino acid
           transporter protein 8 protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 110 HLVAKAKSSATMTARAISENLKHVCWLRTWSLVFRSGP 223
           + + K   S T     I E L H+C + TW++V  SGP
Sbjct: 441 YFIIKFVVSHTEFLGVIDEKLTHLCQILTWTIV-DSGP 477


>Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical
           protein F17C8.3 protein.
          Length = 715

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 97  NHPASPSSQSKVLCYYDSKSYIRESQARMLATDL 198
           N+PA P + +  L YY   S I+ES+ + +   L
Sbjct: 681 NNPAKPGAVTGQLTYYSFLSSIKESRYKPIGVQL 714


>Z48621-7|CAA88546.1|  770|Caenorhabditis elegans Hypothetical
           protein R07B1.9 protein.
          Length = 770

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 168 ISSTYAGYGLGAWSFGLDPFSVPIWR 245
           I+ TY  + LG W +   P  VP +R
Sbjct: 513 ITGTYIVFELGKWRYNEIPIEVPFFR 538


>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase
           2 protein.
          Length = 1668

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 62  SPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKH 178
           S G+W   + LP  Q HLVA    S T+ + A  +N  H
Sbjct: 286 SSGFWALPMFLPNLQKHLVA-IPVSLTLISLAWWQNFVH 323


>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
           protein 2 protein.
          Length = 1668

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 62  SPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKH 178
           S G+W   + LP  Q HLVA    S T+ + A  +N  H
Sbjct: 286 SSGFWALPMFLPNLQKHLVA-IPVSLTLISLAWWQNFVH 323


>AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3a protein.
          Length = 923

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 50  PWSPSPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISEN 169
           P+SP P + R  LR P T    V   KS++  +  + +EN
Sbjct: 18  PFSPIPKFSR--LRTPRTSREYVCPLKSTSPQSPSSSTEN 55


>AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical
           protein W08E12.2 protein.
          Length = 120

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 160 YSSCCHSSRGLCFGY 116
           YSSCC+S+   C GY
Sbjct: 88  YSSCCNSNNFSCCGY 102


>Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical
           protein C49F8.2 protein.
          Length = 771

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 236 WYRKWVQTERPGSKSVASIRA 174
           +Y+KW++TE+P  + V   RA
Sbjct: 528 FYKKWLETEKPIYQEVIHCRA 548


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,779,209
Number of Sequences: 27780
Number of extensions: 111938
Number of successful extensions: 301
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)