Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_P18
         (235 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...    39   5e-04
U40935-5|AAM29686.1|  441|Caenorhabditis elegans Hypothetical pr...    27   2.4  
U40935-4|AAM29687.1|  436|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr...    26   3.1  
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro...    26   3.1  
AF125459-6|AAN60503.1|  219|Caenorhabditis elegans Hypothetical ...    26   3.1  
AF125459-5|AAD12844.1|  345|Caenorhabditis elegans Hypothetical ...    26   3.1  
Z47070-3|CAA87341.1|  528|Caenorhabditis elegans Hypothetical pr...    26   4.1  
U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astaci...    25   5.4  
AJ561221-1|CAD99221.1|  302|Caenorhabditis elegans NAS-33 protei...    25   5.4  
AF047663-2|AAC04450.1|  252|Caenorhabditis elegans Delta/serrate...    25   5.4  
U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical pr...    25   7.2  

>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score = 38.7 bits (86), Expect = 5e-04
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 122 AGKASACAGGPIHDLCASGEASCPDPTIELVKNRLSNV 235
           AGKAS CAG P    CA+G+   PD  +  +++R S +
Sbjct: 20  AGKASGCAGCPNQGSCATGQGPPPDADVPKIQDRFSRI 57


>U40935-5|AAM29686.1|  441|Caenorhabditis elegans Hypothetical
           protein F31E3.2a protein.
          Length = 441

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +2

Query: 14  RLQETSISLXIDFLHQNEWVCQNMHL-NIVL 103
           RL    ++  IDFLHQN+ + +++ L N+VL
Sbjct: 231 RLIGAELASAIDFLHQNDVIYRDVKLENVVL 261


>U40935-4|AAM29687.1|  436|Caenorhabditis elegans Hypothetical
           protein F31E3.2b protein.
          Length = 436

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +2

Query: 14  RLQETSISLXIDFLHQNEWVCQNMHL-NIVL 103
           RL    ++  IDFLHQN+ + +++ L N+VL
Sbjct: 231 RLIGAELASAIDFLHQNDVIYRDVKLENVVL 261


>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
           protein F52E10.1 protein.
          Length = 1201

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +2

Query: 44  IDFLHQNEWVCQNMHLNIVL*TQIEDAGKASACAGGPIHDL-CASGEASCPDPTIELVKN 220
           +DF++ ++ VC  +H +I L +Q +  G A      P H L CA  + S  D  ++LV++
Sbjct: 81  LDFINFDKKVCDGIHSSIKLVSQRDQTGPAPF----PKHKLTCAHCDWSF-DNVMKLVRH 135

Query: 221 R 223
           R
Sbjct: 136 R 136


>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
           protein protein.
          Length = 1203

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +2

Query: 44  IDFLHQNEWVCQNMHLNIVL*TQIEDAGKASACAGGPIHDL-CASGEASCPDPTIELVKN 220
           +DF++ ++ VC  +H +I L +Q +  G A      P H L CA  + S  D  ++LV++
Sbjct: 81  LDFINFDKKVCDGIHSSIKLVSQRDQTGPAPF----PKHKLTCAHCDWSF-DNVMKLVRH 135

Query: 221 R 223
           R
Sbjct: 136 R 136


>AF125459-6|AAN60503.1|  219|Caenorhabditis elegans Hypothetical
           protein Y25C1A.8b protein.
          Length = 219

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 122 AGKASACAGGPIHDLCASGEASCPDPTIELVKNR 223
           A  + AC        C+ GE SCP+   E  K+R
Sbjct: 94  AAGSEACDDSECSCSCSGGECSCPESEDEKEKDR 127


>AF125459-5|AAD12844.1|  345|Caenorhabditis elegans Hypothetical
           protein Y25C1A.8a protein.
          Length = 345

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 122 AGKASACAGGPIHDLCASGEASCPDPTIELVKNR 223
           A  + AC        C+ GE SCP+   E  K+R
Sbjct: 220 AAGSEACDDSECSCSCSGGECSCPESEDEKEKDR 253


>Z47070-3|CAA87341.1|  528|Caenorhabditis elegans Hypothetical
           protein T09B9.4 protein.
          Length = 528

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 188 MRLRQRHIDHESGLQRMRKL 129
           MRLR   +DHES L++ ++L
Sbjct: 271 MRLRAEKVDHESALEQEQEL 290


>U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astacin
           protease protein33 protein.
          Length = 644

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +3

Query: 3   FIETDYKKLQYHYX*TFFIKMSGCARICTSTLSCEH 110
           FI T   +++  +     +  + C+ ICT+ ++C+H
Sbjct: 361 FINTIGNRVEPSFLDLKLLNTAFCSNICTNRINCQH 396


>AJ561221-1|CAD99221.1|  302|Caenorhabditis elegans NAS-33 protein
           protein.
          Length = 302

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +3

Query: 3   FIETDYKKLQYHYX*TFFIKMSGCARICTSTLSCEH 110
           FI T   +++  +     +  + C+ ICT+ ++C+H
Sbjct: 215 FINTIGNRVEPSFLDLKLLNTAFCSNICTNRINCQH 250


>AF047663-2|AAC04450.1|  252|Caenorhabditis elegans
           Delta/serrate/lag-2 domain protein1 protein.
          Length = 252

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 126 PASSICVHRTMLRCIFWHTH 67
           P     +HR  LR I W+TH
Sbjct: 81  PVEKFQIHRVTLRSIRWNTH 100


>U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical
           protein C24B5.4 protein.
          Length = 284

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 170 HIDHESGLQRMRKLCRRPQFVFTG 99
           HIDH+  + ++ K+C  P+    G
Sbjct: 55  HIDHQFDIPKIGKVCEHPEAAVFG 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,722,454
Number of Sequences: 27780
Number of extensions: 106083
Number of successful extensions: 253
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 12,740,198
effective HSP length: 57
effective length of database: 11,156,738
effective search space used: 223134760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)