Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_P18
(235 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50960.1 68418.m06320 nucleotide-binding family protein simil... 37 0.002
At4g15730.1 68417.m02394 expressed protein 27 1.7
At4g34630.1 68417.m04918 expressed protein 27 2.2
At4g30140.1 68417.m04285 GDSL-motif lipase/hydrolase family prot... 26 3.8
At1g16140.1 68414.m01934 wall-associated kinase, putative contai... 26 3.8
At5g56890.1 68418.m07099 protein kinase family protein contains ... 25 6.7
At1g49405.1 68414.m05538 integral membrane protein, putative con... 25 6.7
At3g18380.2 68416.m02338 expressed protein 25 8.9
At2g33590.1 68415.m04117 cinnamoyl-CoA reductase family similar ... 25 8.9
At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine deacet... 25 8.9
At1g25141.1 68414.m03121 UDP-3-0-acyl N-acetylglucosamine deacet... 25 8.9
At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine deacet... 25 8.9
At1g24880.1 68414.m03111 UDP-3-0-acyl N-acetylglucosamine deacet... 25 8.9
At1g24793.1 68414.m03107 UDP-3-0-acyl N-acetylglucosamine deacet... 25 8.9
>At5g50960.1 68418.m06320 nucleotide-binding family protein similar
to Nucleotide-binding protein 1 (NBP 1) (SP:Q9R060) [Mus
musculus]; contains Pfam PF00991 : ParA family ATPase
Length = 350
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 110 QIEDAGKASACAGGPIHDLCASGEASCPDPTIELVKNRLSNV 235
Q E AGK+ +CAG P + CA+ PDP + + R+S V
Sbjct: 18 QSESAGKSDSCAGCPNQEACATAPKG-PDPDLVAIAERMSTV 58
>At4g15730.1 68417.m02394 expressed protein
Length = 1059
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 127 AGVLNLCSQDNVEVHILAH 71
A VL +CS DNVEV ++H
Sbjct: 851 ASVLEMCSTDNVEVGKMSH 869
>At4g34630.1 68417.m04918 expressed protein
Length = 199
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 197 DLDMRLRQRHIDHESGLQRMRKLCRR 120
DLD L R + + G QRMRKL +R
Sbjct: 143 DLDEELVPRSVSKKVGRQRMRKLGKR 168
>At4g30140.1 68417.m04285 GDSL-motif lipase/hydrolase family protein
low similarity to family II lipases EXL3 GI:15054386,
EXL1 GI:15054382 from [Arabidopsis thaliana]; contains
Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase
Length = 348
Score = 25.8 bits (54), Expect = 3.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 125 GKASACAGGPIHDLCASGEASCPD 196
G S C P +LCA+ CPD
Sbjct: 285 GDRSCCTVNPGEELCAANGPVCPD 308
>At1g16140.1 68414.m01934 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 690
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 99 SCEHKLRTPAKLPHALEARFMIY 167
SC K+ PAKL H L F +Y
Sbjct: 313 SCVPKITKPAKLAHVLRGIFGLY 335
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 213 TSSIVGSGHEASPEAHRS*IGPPAHAEALPA 121
TS G SPE+H+S PP+ A + P+
Sbjct: 41 TSKGFGQAPSNSPESHKSDNVPPSKASSQPS 71
>At1g49405.1 68414.m05538 integral membrane protein, putative
contains 4 transmembrane domains; contains Pfam PF04535
: Domain of unknown function (DUF588)
Length = 152
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 131 ASACAGGPIHDLCASGEASCPDPTI 205
ASA + + D+ S E+SCP PTI
Sbjct: 96 ASASSAASVVDILRSNESSCP-PTI 119
>At3g18380.2 68416.m02338 expressed protein
Length = 349
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 182 LRQRHIDHESGLQRMRKLCRRPQ 114
+R H E + +RK+CRRP+
Sbjct: 252 VRYSHDQSEQEIVPLRKICRRPE 274
>At2g33590.1 68415.m04117 cinnamoyl-CoA reductase family similar to
cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
Eucalyptus gunnii [GI:2058311]
Length = 321
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 134 SACAG--GPIHDLCASGEASCPDPTIELV 214
SA AG G H C AS P+P +EL+
Sbjct: 73 SAIAGCSGVFHVACPVPPASVPNPEVELI 101
>At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 955
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 81 ICTSTLSCEHKLRTPAKLPHALEAR 155
+CT+ L E K+RT L ALEA+
Sbjct: 331 LCTTLLKDELKIRTVEHLLSALEAK 355
>At1g25141.1 68414.m03121 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain;
Length = 925
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 81 ICTSTLSCEHKLRTPAKLPHALEAR 155
+CT+ L E K+RT L ALEA+
Sbjct: 331 LCTTLLKDELKIRTVEHLLSALEAK 355
>At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 949
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 81 ICTSTLSCEHKLRTPAKLPHALEAR 155
+CT+ L E K+RT L ALEA+
Sbjct: 331 LCTTLLKDELKIRTVEHLLSALEAK 355
>At1g24880.1 68414.m03111 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain; similar to ESTs dbj AV442495.1, gb|BE522756.1,
gb|T42945.1, gb|BE525268.1, gb|BE523201.1,
gb|BE526298.1, gb|T42945.1, gb|AA651584.1,
dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1
Length = 905
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 81 ICTSTLSCEHKLRTPAKLPHALEAR 155
+CT+ L E K+RT L ALEA+
Sbjct: 331 LCTTLLKDELKIRTVEHLLSALEAK 355
>At1g24793.1 68414.m03107 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain; similar to ESTs dbj AV442495.1, gb|BE522756.1,
gb|T42945.1, gb|BE525268.1, gb|BE523201.1,
gb|BE526298.1, gb|T42945.1, gb|AA651584.1,
dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1
Length = 925
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 81 ICTSTLSCEHKLRTPAKLPHALEAR 155
+CT+ L E K+RT L ALEA+
Sbjct: 331 LCTTLLKDELKIRTVEHLLSALEAK 355
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,359,857
Number of Sequences: 28952
Number of extensions: 98532
Number of successful extensions: 214
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 12,070,560
effective HSP length: 57
effective length of database: 10,420,296
effective search space used: 208405920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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