Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_P17
         (428 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5497| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.0  
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)                     27   6.6  
SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)                 27   8.7  
SB_4140| Best HMM Match : ANF_receptor (HMM E-Value=0.013)             27   8.7  

>SB_5497| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 144

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 15  FCNSAFSLLNDNGFFFHPYLHILTMLDKQR 104
           FC S F+ L++ G     YLH+L  LDK R
Sbjct: 4   FCCSYFAALDNVGQVDCVYLHMLKALDKAR 33


>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
          Length = 1702

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +2

Query: 158  WGYIVQQFSQSVYI-LGAGFLLAAVLTVPP-WPMYRRNPLNWQNP 286
            W Y+    S  V I LG    L  VL V P W + R   L+W NP
Sbjct: 1094 WAYLRGGISVPVIISLGLFACLTPVLGVAPNWVLARWAHLSWSNP 1138


>SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)
          Length = 1477

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/59 (23%), Positives = 24/59 (40%)
 Frame = -1

Query: 356 NYLYKFFHFIFSLSCLSVSHRYFLDSASSMDFCDTWAMEARSGQQQVEIQLQGYIQIVK 180
           NYLY     ++  SC+S   RY +D            +   +    V  + +G I ++K
Sbjct: 267 NYLYDALGLLYKKSCISGDTRYIVDPFGVYGVSTIGQISGGNVTHFVHAEEKGLISLIK 325


>SB_4140| Best HMM Match : ANF_receptor (HMM E-Value=0.013)
          Length = 472

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 317 SCLSVSHRYFLDSASSM 267
           SC   SH+YF D+A+SM
Sbjct: 279 SCSEASHQYFRDNAASM 295


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,434,594
Number of Sequences: 59808
Number of extensions: 252888
Number of successful extensions: 651
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)