Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_P17
         (428 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043693-5|AAB97532.1|  105|Caenorhabditis elegans Hypothetical ...    71   3e-13
CU457744-3|CAM36369.1|  247|Caenorhabditis elegans Hypothetical ...    30   0.81 
U41263-8|AAC24430.1|  455|Caenorhabditis elegans Hypothetical pr...    27   4.3  
AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine re...    27   4.3  
Z72512-5|CAA96667.2|  351|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AF024501-2|AAB70367.2|  334|Caenorhabditis elegans Serpentine re...    27   5.7  
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm...    27   7.5  
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm...    27   7.5  
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ...    27   7.5  
AC024832-7|AAL27257.1|  389|Caenorhabditis elegans Hypothetical ...    27   7.5  
AC024832-6|AAL27256.1|  459|Caenorhabditis elegans Hypothetical ...    27   7.5  
Z99284-2|CAL49452.1|  546|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z92796-7|CAB63230.2|  546|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z75529-5|CAA99784.1|  610|Caenorhabditis elegans Hypothetical pr...    26   10.0 
U41263-7|AAC24431.1|  462|Caenorhabditis elegans Hypothetical pr...    26   10.0 
AC026301-11|AAK68891.2|  273|Caenorhabditis elegans Hypothetical...    26   10.0 

>AF043693-5|AAB97532.1|  105|Caenorhabditis elegans Hypothetical
           protein C34B2.10 protein.
          Length = 105

 Score = 71.3 bits (167), Expect = 3e-13
 Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = +2

Query: 68  IPTHIDYVGQAKAEKLYRAIITLFSIVGFIWGYIVQQFSQSVY-ILGAGFLLAAVLTVPP 244
           + +HID+ GQ  AE+ Y+ I+T+  I+GF+ G+  QQ S +++ +LGA    A ++ +PP
Sbjct: 15  LSSHIDFQGQKVAERTYQVILTIAGIIGFLVGFWTQQLSYAMFTVLGASAFTALII-LPP 73

Query: 245 WP-MYRRNPLNWQNPRNTDE 301
           WP ++R+NP+ W  P    E
Sbjct: 74  WPFLFRKNPIVWHTPAEPQE 93


>CU457744-3|CAM36369.1|  247|Caenorhabditis elegans Hypothetical
           protein T06A10.4 protein.
          Length = 247

 Score = 29.9 bits (64), Expect = 0.81
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +1

Query: 79  Y*LCWTSKG*KIIQSDNHIIQYSWFHLGLYCSTVFTICIYPWSWISTCCCPDRASMAHVS 258
           Y  C   K   +I+ +N   +Y WFH    C  + T     W   + C     A++A   
Sbjct: 177 YCWCQLDKNDTMIECENPGCKYGWFH--FTCIGMITAPAGDWYCTNECRAQGLAAVAEAP 234

Query: 259 QKSIELAESKK 291
           QK+ +    KK
Sbjct: 235 QKAPQRKGLKK 245


>U41263-8|AAC24430.1|  455|Caenorhabditis elegans Hypothetical
           protein T19D12.10 protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +2

Query: 134 LFSIVGFI---WGYIVQQFSQSVYILGAGFLLAAVLTVPPWPMYRRNPLNWQN 283
           LFS +G I   W  I +  S  +  L AGF L+ ++T+P   +   + L W++
Sbjct: 136 LFSSIGSISEGWSPIAE-ISTYIAFLSAGFQLSNIITMPLSGILCESSLGWRS 187


>AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine
           receptor, class w protein40 protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 391 YVYLKIREIIFKTIYTSFSISFFPFLA 311
           ++YLK+R I F   + SF+I F  F A
Sbjct: 25  FIYLKVRCIRFYADFVSFTICFVGFFA 51


>Z72512-5|CAA96667.2|  351|Caenorhabditis elegans Hypothetical
           protein R07B5.7 protein.
          Length = 351

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 376 IREIIFKTIYTSFSISFFPFLAC 308
           I+ I F T Y ++S   FPFL C
Sbjct: 118 IKLIFFLTFYFNYSAMVFPFLLC 140


>Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical
           protein F17A2.9 protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 95  QAKAEKLYRAIITLFSIVGFIWGYIVQQFSQSVYILGAGFLL 220
           Q K  +L  AIIT  S++G++    +  F  +V I G+ FLL
Sbjct: 158 QKKFNEL-NAIITDHSVIGYVISGRISSFLLTVIIFGSVFLL 198


>AF024501-2|AAB70367.2|  334|Caenorhabditis elegans Serpentine
           receptor, class i protein63 protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 18/78 (23%), Positives = 30/78 (38%)
 Frame = +1

Query: 1   FVVVAFVTQHFLC*TIMDFFFIHTYTY*LCWTSKG*KIIQSDNHIIQYSWFHLGLYCSTV 180
           F+ +  VT HF    +M        +   C+  K   I ++    +  SW   G++    
Sbjct: 82  FLSMFGVTTHFCMTALMACLIYQIESMVFCFVRKHQTIAKTLKKYVMPSWLVWGIFAFFT 141

Query: 181 FTICIYPWSWISTCCCPD 234
           F IC+    +  T   PD
Sbjct: 142 FGICLTVILFSQTSIDPD 159


>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
           morphology protein1, isoform a protein.
          Length = 1117

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 275 WQNPRNTDEKPTXXXXXXXXXXTCINSFKYYFSYF 379
           W+NP  TDEK              IN   + FS+F
Sbjct: 64  WRNPAATDEKHANQRAYVTCNYDMINPSNWLFSHF 98


>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
           morphology protein1, isoform b protein.
          Length = 1122

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 275 WQNPRNTDEKPTXXXXXXXXXXTCINSFKYYFSYF 379
           W+NP  TDEK              IN   + FS+F
Sbjct: 64  WRNPAATDEKHANQRAYVTCNYDMINPSNWLFSHF 98


>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
           tyrosine kinase protein.
          Length = 1122

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 275 WQNPRNTDEKPTXXXXXXXXXXTCINSFKYYFSYF 379
           W+NP  TDEK              IN   + FS+F
Sbjct: 64  WRNPAATDEKHANQRAYVTCNYDMINPSNWLFSHF 98


>AC024832-7|AAL27257.1|  389|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.1b protein.
          Length = 389

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 353 YLYKFFHFIFSLSCLSV 303
           Y Y FFHF+F+L+ L V
Sbjct: 320 YSYSFFHFMFALASLYV 336


>AC024832-6|AAL27256.1|  459|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.1a protein.
          Length = 459

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 353 YLYKFFHFIFSLSCLSV 303
           Y Y FFHF+F+L+ L V
Sbjct: 390 YSYSFFHFMFALASLYV 406


>Z99284-2|CAL49452.1|  546|Caenorhabditis elegans Hypothetical
           protein H25K10.1 protein.
          Length = 546

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 245 WPMYRRNPLNWQNPRNTDEKP 307
           WP+Y +NP   +NP +    P
Sbjct: 324 WPIYNKNPYKSENPGHIKNAP 344


>Z92796-7|CAB63230.2|  546|Caenorhabditis elegans Hypothetical
           protein H25K10.1 protein.
          Length = 546

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 245 WPMYRRNPLNWQNPRNTDEKP 307
           WP+Y +NP   +NP +    P
Sbjct: 324 WPIYNKNPYKSENPGHIKNAP 344


>Z75529-5|CAA99784.1|  610|Caenorhabditis elegans Hypothetical
           protein C44H9.6 protein.
          Length = 610

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 140 SIVGFIWGYIVQQFSQSVYILGAGFLLAAV 229
           +I+GFI+ YIV+   + +++LG G LL  V
Sbjct: 388 NIIGFIF-YIVKWLFKHLFLLGLGALLTYV 416


>U41263-7|AAC24431.1|  462|Caenorhabditis elegans Hypothetical
           protein T19D12.9 protein.
          Length = 462

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +2

Query: 134 LFSIVGFI---WGYIVQQFSQSVYILGAGFLLAAVLTVPPWPMYRRNPLNWQ 280
           LFS +G I   W  I +  S  V  L AGF +++++ +P   +   + L W+
Sbjct: 141 LFSAIGSISEGWSPIAE-ISTYVAFLSAGFQISSIILMPVSGVLCESQLGWR 191


>AC026301-11|AAK68891.2|  273|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.12 protein.
          Length = 273

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +2

Query: 50  WIFFSSIPTHIDYVGQAKAEKLYRAIITL 136
           ++F +  P H+ Y+ Q +  KL+R  +++
Sbjct: 65  YLFMTGYPIHMSYITQTEIAKLFRKKLSI 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,532,925
Number of Sequences: 27780
Number of extensions: 201308
Number of successful extensions: 695
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)