Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_P12
(373 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 27 3.2
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 3.2
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 3.2
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 27 3.2
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 27 3.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 4.3
AC006674-12|AAO38617.1| 357|Caenorhabditis elegans Hypothetical... 27 4.3
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 27 5.7
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 5.7
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 5.7
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 27 5.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 26 7.5
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 26 7.5
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 26 9.9
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 26 9.9
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 26 9.9
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 135 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 251
V A P P F+ P+ P PI GPAF P P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 135 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 251
V A P P F+ P+ P P+ GPAF P P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 218 VRRFQSSQLSTQAIRQTSRP 277
+RR+QSS+++ +A R+T RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 132 VVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDKPLAR 278
VV+A P N PS N I V F PN PPK+ + + +
Sbjct: 272 VVVATPGRLIDHLHNSPSFNLSNIE-----VFFKTPNIPPKKNSRKICK 315
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 93 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 218
D SG P G DP +QPS GP G + P P+
Sbjct: 291 DPSGAPPSGGPPGPF----DPSGAQPSGGPPGPFNPSGAPPS 328
>AC006674-12|AAO38617.1| 357|Caenorhabditis elegans Hypothetical
protein K12H6.6b protein.
Length = 357
Score = 27.1 bits (57), Expect = 4.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 123 YCRPMEHHYCPPRELCLRQPWP 58
+C P+++ Y P + L PWP
Sbjct: 282 HCSPLQYPYSNPYSILLDAPWP 303
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 327 SPSFKIANLYETFTSHHGREV 265
SP + +A LYE TS HG+ V
Sbjct: 322 SPDYLLAALYEGSTSFHGKSV 342
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 147 PDPFFSQPSNGPSGNYEPIS 206
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 147 PDPFFSQPSNGPSGNYEPIS 206
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 327 SPSFKIANLYETFTSHHGREV 265
SP + +A LYE TS HG+ V
Sbjct: 322 SPDYLLAALYEGSTSFHGKSV 342
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 26.2 bits (55), Expect = 7.5
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 144 NPDPFFSQPS-NGPSGNYEPISTGPAFVDFNHPNYPPK 254
NP P PS NGPS +P GP+ N P+ P K
Sbjct: 939 NPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNK 976
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 117 GNSDHVVIANPDPFFSQPSNGPSG 188
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 265 NLSPVVGSKCLIKISDFKTRRN 330
N PVVG C+IK S+ + + N
Sbjct: 385 NFDPVVGKFCVIKKSEHENKEN 406
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 265 NLSPVVGSKCLIKISDFKTRRN 330
N PVVG C+IK S+ + + N
Sbjct: 385 NFDPVVGKFCVIKKSEHENKEN 406
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 117 GNSDHVVIANPDPFFSQPSNGPSG 188
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSRG 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,565,314
Number of Sequences: 27780
Number of extensions: 176134
Number of successful extensions: 571
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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