Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_P10
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical pr...   134   6e-32
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    33   0.15 
AF016443-9|AAC24273.1|  364|Caenorhabditis elegans Hypothetical ...    31   0.47 
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr...    28   0.75 
Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AC024201-6|AAF36016.1|  183|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical ...    29   3.3  
AF038613-10|AAB92047.1|  148|Caenorhabditis elegans Hypothetical...    29   3.3  
AB096632-1|BAC76732.1|  500|Caenorhabditis elegans methionyl-tRN...    28   5.8  
AF099925-9|AAC69500.1|  150|Caenorhabditis elegans Hypothetical ...    27   7.7  

>U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical
           protein T27F7.3b protein.
          Length = 109

 Score =  134 bits (323), Expect = 6e-32
 Identities = 65/112 (58%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
 Frame = +3

Query: 120 MSIQNLNTFDPFADAIKS--SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 293
           MSI NLN   P ADA +   +ED V+ G+ H+RIQQR GRKT+TTVQG+ +EYDLK+IV+
Sbjct: 1   MSIANLNR--P-ADAFEQLETEDGVRQGVCHIRIQQRTGRKTITTVQGIGTEYDLKRIVQ 57

Query: 294 ACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
             KK+ +CNGT+VEHPEYGEV+QL GDQR+ +  +L K G+V     +VHGF
Sbjct: 58  YLKKKHSCNGTIVEHPEYGEVIQLTGDQRDKVKDFLIKVGIVNESNCRVHGF 109


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
 Frame = -1

Query: 498 PRIIQYFLNMVCAWRPKSRELLVARASQGPI**ATDKCSRAGRL------AVAAPRRTPG 337
           P+ +Q  +   C  R ++R L    ASQ  +      CS A +L      A  AP+ T  
Sbjct: 259 PQQVQITIPQTCQSRCENRCLSTCTASQPSV--CAPSCSTACQLSCDSIGAATAPQSTNP 316

Query: 336 APQRYRCTRTPSCMP 292
            P   R   TP+CMP
Sbjct: 317 TPVEVRALCTPTCMP 331


>AF016443-9|AAC24273.1|  364|Caenorhabditis elegans Hypothetical
           protein C17E7.4 protein.
          Length = 364

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 255 PAPWSMFYARSAAGFGRALDHLARRPPSF**HRRMGRMCSDS 130
           PAP S  Y      F R++D L   PPS+  +  +  +CS S
Sbjct: 258 PAPRSFAYPNPPLPFHRSMDFLNSGPPSYLYNENLSSLCSSS 299


>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
            C27F2.8 protein.
          Length = 1715

 Score = 28.3 bits (60), Expect(2) = 0.75
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 360  AAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRTSPAP 247
            A P   P  P   +  RTPS  P++S+ +  P +SPAP
Sbjct: 1354 AIPVERPKQPTPSKA-RTPSKTPSQSNRAQHPASSPAP 1390



 Score = 21.0 bits (42), Expect(2) = 0.75
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 273  HIPRTSPAPWSMFYARSAAGFGRALD 196
            H+P TS     +FY +  +  G  +D
Sbjct: 1403 HVPPTSLTSPDLFYRQFLSSMGMPMD 1428


>Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical
           protein F59C6.8 protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 108 TFNRMSIQNLNTFDPF-ADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTV 251
           TFNR  I N   FDP+  +A K +   + DGL +  + + R  + T+ T+
Sbjct: 398 TFNRSKISNPPFFDPYHLNATKRAIYKISDGLKIQRKFKNRVSQGTMKTI 447


>AC024201-6|AAF36016.1|  183|Caenorhabditis elegans Hypothetical
           protein Y71F9B.3 protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = +3

Query: 213 IQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENIC 392
           ++Q+ G K L  V G+     L  ++     +  CN     +P Y  +  ++   +E+  
Sbjct: 31  VEQKTGVKRLHLVLGVVGLQALY-LIFGHSAQLVCNFMGFVYPAYMSIKAIESSNKEDDT 89

Query: 393 QWLT 404
           QWLT
Sbjct: 90  QWLT 93


>AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical
           protein B0205.10 protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 360 AAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRT-SPAP 247
           +AP  TP AP       TP   PA  + +  P T +PAP
Sbjct: 101 SAPEPTPDAPAAAPVQETPQVAPAPETPAPAPETPAPAP 139


>AF038613-10|AAB92047.1|  148|Caenorhabditis elegans Hypothetical
           protein F42A6.2 protein.
          Length = 148

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -1

Query: 372 RLAVAAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRTSPAPWSMFYARSAAGFGRA 202
           R  +AAP  TP AP+       P+  PA S SS     S A     +      FG++
Sbjct: 77  RSTLAAPTPTPAAPELRSTLSAPTPTPAPSGSSGFSFGSIAKLMEEFMEKVFNFGKS 133


>AB096632-1|BAC76732.1|  500|Caenorhabditis elegans methionyl-tRNA
           synthetase (mitochondrial)protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
 Frame = +3

Query: 135 LNTFDP-FADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR--ACKK 305
           + T DP   +A++     +QD   ++     +G  ++T    +  E  +KKIV   A K 
Sbjct: 79  IRTTDPAHLEAVQHFWMKIQDN-GYIYKSTYSGYYSITDECFIPEEDVVKKIVEGGAEKL 137

Query: 306 EFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLV 419
               NGT VE  E    +    + RE + +W+ +  +V
Sbjct: 138 TLKSNGTPVEWIEEENYMFRLSEFREKVAEWINRENIV 175


>AF099925-9|AAC69500.1|  150|Caenorhabditis elegans Hypothetical
           protein K01A2.9 protein.
          Length = 150

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 346 YSGCSTTVPLHANSFLHARTIFFK 275
           YS C+TTV +  +  LH+ ++F+K
Sbjct: 126 YSSCATTVSVGIHLVLHSMSVFWK 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,159,426
Number of Sequences: 27780
Number of extensions: 299353
Number of successful extensions: 1022
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)