Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_P08
(675 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 320 5e-88
At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 318 2e-87
At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) ... 167 8e-42
At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) 161 5e-40
At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 159 1e-39
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 143 8e-35
At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 142 1e-34
At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 141 3e-34
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 141 4e-34
At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 129 2e-30
At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 128 3e-30
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 124 5e-29
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 48 6e-06
At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (P... 34 0.100
At2g27680.1 68415.m03354 aldo/keto reductase family protein cont... 31 0.70
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 29 2.1
At4g35560.1 68417.m05053 expressed protein 28 5.0
At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 28 5.0
At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 28 6.6
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 27 8.7
At4g24020.1 68417.m03452 RWP-RK domain-containing protein simila... 27 8.7
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 27 8.7
At3g04370.1 68416.m00462 hypothetical protein contains Pfam prof... 27 8.7
>At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1)
(PRC3) identical to proteasome subunit alpha type 2
SP:O23708, GI:6093778; identical to cDNA proteasome
subunit prc3 GI:2511573
Length = 235
Score = 320 bits (786), Expect = 5e-88
Identities = 152/223 (68%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Frame = +2
Query: 5 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 184
+YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIKASNGVVIATE K SIL DE SV K
Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 185 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 364
++ +T +IG+VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ ATVMQE+TQS
Sbjct: 65 IQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 365 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL 544
GGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFLEKRYTED+EL
Sbjct: 125 GGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMEL 184
Query: 545 DDAVHTAILTLKEGFEGQMTADNIEVGICDASG-FRKLEPAHV 670
DDA+HTAILTLKEGFEG++++ NIE+G A FR L PA +
Sbjct: 185 DDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEI 227
>At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative
nearly identical to SP|O23708 Proteasome subunit alpha
type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B)
{Arabidopsis thaliana} and to At1g16470
Length = 235
Score = 318 bits (782), Expect = 2e-87
Identities = 152/223 (68%), Positives = 185/223 (82%), Gaps = 1/223 (0%)
Frame = +2
Query: 5 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 184
+YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIKASNGVVIATE K SIL DE SV K
Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 185 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 364
++ +T +IG VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ ATVMQE+TQS
Sbjct: 65 IQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 365 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL 544
GGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFLEKRYTED+EL
Sbjct: 125 GGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMEL 184
Query: 545 DDAVHTAILTLKEGFEGQMTADNIEVG-ICDASGFRKLEPAHV 670
DDA+HTAILTLKEGFEG++++ NIE+G I FR L PA +
Sbjct: 185 DDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEI 227
>At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2)
(PRS1) (PRC6) identical to SP|O24616 Proteasome subunit
alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha
subunit D2) {Arabidopsis thaliana}
Length = 250
Score = 167 bits (405), Expect = 8e-42
Identities = 90/226 (39%), Positives = 131/226 (57%), Gaps = 4/226 (1%)
Frame = +2
Query: 5 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 184
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+A E K L D S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 185 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 364
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 365 GGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 538
GGVRPFG+S LI G++ + P L+Q DPSG + AWKA A G+N N+ + FLEK Y E
Sbjct: 123 GGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES- 181
Query: 539 ELDDAVHTAILTLKEGFEGQMTADNIEVGIC--DASGFRKLEPAHV 670
+ + AI L E E NIEV + + +G R+LE A +
Sbjct: 182 SGQETIKLAIRALLEVVES--GGKNIEVAVMTREETGLRQLEEAEI 225
>At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1)
Length = 250
Score = 161 bits (390), Expect = 5e-40
Identities = 86/210 (40%), Positives = 121/210 (57%), Gaps = 2/210 (0%)
Frame = +2
Query: 5 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 184
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+A E K L D S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 185 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 364
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 365 GGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 538
GGVRPFG+S LI G++ P L+Q DPSG + AWKA A G+N N+ + FLEK Y E
Sbjct: 123 GGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESA 182
Query: 539 ELDDAVHTAILTLKEGFEGQMTADNIEVGI 628
+ V AI L E E NIEV +
Sbjct: 183 G-QETVKLAIRALLEVVES--GGKNIEVAV 209
>At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1)
(PRC9) identical to GB:AAC32057 from [Arabidopsis
thaliana] (Genetics (1998) 149 (2), 677-692); identical
to cDNA proteasome subunit prc9 GI:2511583
Length = 250
Score = 159 bits (387), Expect = 1e-39
Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Frame = +2
Query: 5 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHSVN 181
RY T FSP G+L Q+EYA+ A+ G+++GI + +GVV+ E K S +L S
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAE 63
Query: 182 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 361
K+ I H+ +G+ D +L+ AR AQ+Y MY EP+P QLVQ + Q YTQ
Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQ 123
Query: 362 SGGVRPFGVSLLICGWENDRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 538
GG+RPFGVS L GW+ + L+ DPSG Y WKA A+G N ++ L++ Y +D
Sbjct: 124 FGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDA 183
Query: 539 ELDDAVHTAILTLKEGFEG-QMTADNIEV 622
++AV A+ L + + +T++ +E+
Sbjct: 184 TREEAVELALKVLTKTMDSTSLTSEKLEL 212
>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
identical to GB:AF043519
Length = 246
Score = 143 bits (347), Expect = 8e-35
Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 6/227 (2%)
Frame = +2
Query: 8 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 184
Y +T FSP G+L Q+EYA AV AAG TS+G++ + V + T+ K L D+ SV+
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSH 68
Query: 185 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 364
+ +T ++G++ +GM D R LV QAR A ++ Y +P L + +A Q YTQ
Sbjct: 69 LFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQH 128
Query: 365 GGVRPFGVSLLICGWENDR-PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED-- 535
+RP GV ++ G + +R P L++CDP+G ++ KAT+ G FLEK+ E+
Sbjct: 129 AYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPA 188
Query: 536 LELDDAVHTAILTLKEGFEGQMTADNIEVGICDASG--FRKLEPAHV 670
D+ V TAI L+ + A IEVG+ A FR L +
Sbjct: 189 FTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEI 235
>At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1)
identical to 20S proteasome subunit PAE1 GI:3421087 from
[Arabidopsis thaliana]
Length = 237
Score = 142 bits (345), Expect = 1e-34
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 3/208 (1%)
Frame = +2
Query: 8 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 187
Y + TFSP G+L Q+EYA+ A+ G T++G+K GVV+A E + S L + SV K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 188 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPI---PTAQLVQRVATVMQEYT 358
I HIG SG+ D R LV AR Q + Y EP+ T Q + +A E
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 359 QSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 538
+ RPFGVSLLI G + + P L+ DPSG ++ A A+G + L++++ +DL
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDL 187
Query: 539 ELDDAVHTAILTLKEGFEGQMTADNIEV 622
L +A A+ LK+ E ++T +N+++
Sbjct: 188 SLQEAETIAVSILKQVMEEKVTPNNVDI 215
>At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2)
identical to 20S proteasome subunit PAE2 GB:AAC32061
from [Arabidopsis thaliana]
Length = 237
Score = 141 bits (342), Expect = 3e-34
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 3/208 (1%)
Frame = +2
Query: 8 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 187
Y + TFSP G+L Q+EYA+ A+ G T++G+K GVV+A E + S L + SV K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 188 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPI---PTAQLVQRVATVMQEYT 358
I HIG SG+ D R LV AR Q + Y EP+ T Q + +A E
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 359 QSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 538
+ RPFGVSLLI G + + P L+ DPSG ++ A A+G + L++++ +D+
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDI 187
Query: 539 ELDDAVHTAILTLKEGFEGQMTADNIEV 622
L +A A+ LK+ E ++T +N+++
Sbjct: 188 TLQEAETIAVSILKQVMEEKVTPNNVDI 215
>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
(PRC1) identical to proteasome subunit alpha type 6-1
SP:O81146 GI:12643647 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc1 GI:2511587
Length = 246
Score = 141 bits (341), Expect = 4e-34
Identities = 83/228 (36%), Positives = 121/228 (53%), Gaps = 6/228 (2%)
Frame = +2
Query: 8 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 184
Y +T FSP G+L Q+EYA AV AG TS+G++ + V + T+ K L D+ SV
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTH 68
Query: 185 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 364
+ IT +IG+V +G+ D R LV QAR A ++ Y +P L + +A Q YTQ
Sbjct: 69 LFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQH 128
Query: 365 GGVRPFGVSLLICGW-ENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED-- 535
+RP GV ++ G E + P L++CDP+G ++ KAT+ G FLEK+ E+
Sbjct: 129 AYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPS 188
Query: 536 LELDDAVHTAILTLKEGFEGQMTADNIEVGICDASG--FRKLEPAHVK 673
D+ V TAI L+ + A IEVG+ A FR L ++
Sbjct: 189 FTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIE 236
>At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1)
(gb|AAC32062.1)
Length = 278
Score = 129 bits (311), Expect = 2e-30
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 2/223 (0%)
Frame = +2
Query: 5 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 184
+Y +TT+SP+G+L Q+EYA+ AV G ++G+++ + VV+A NK +S L H K
Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL-SSHQ-RK 62
Query: 185 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 364
+ + HIG+ +G+ D R+L R + + Y P+P +LV +A Q TQ
Sbjct: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQR 122
Query: 365 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE--DL 538
RP+GV LL+ G + +L+ PSG YF ++A A+G KT+LE+R+ D
Sbjct: 123 SWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDS 182
Query: 539 ELDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRKLEPAH 667
+D + AIL ++E +G + ++ +C + EP H
Sbjct: 183 SREDLIKDAILAVRETLQG----ETLKSSLCTVAILGVDEPFH 221
>At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2)
(PRC2B) (PRS1) identical to GB:AAC32063 from
[Arabidopsis thaliana] (Genetics 149 (2), 677-692
(1998)); identical to cDNA proteasome subunit prc2b
GI:2511585
Length = 277
Score = 128 bits (309), Expect = 3e-30
Identities = 71/223 (31%), Positives = 121/223 (54%), Gaps = 2/223 (0%)
Frame = +2
Query: 5 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 184
+Y +TT+SP+G+L Q+EYA+ AV G ++G+++ + VV+A NK +S L H K
Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL-SSHQ-RK 62
Query: 185 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 364
+ + HIG+ +G+ D R+L R + + Y P+P +LV +A Q TQ
Sbjct: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQR 122
Query: 365 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT--EDL 538
RP+GV LL+ G + +L+ PSG YF ++A A+G KT+LE+++ ++
Sbjct: 123 SWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQES 182
Query: 539 ELDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRKLEPAH 667
+D + AI+ ++E +G + ++ +C S EP H
Sbjct: 183 SKEDLIKDAIMAIRETLQG----ETLKSSLCTVSVLGVDEPFH 221
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 124 bits (299), Expect = 5e-29
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 2/213 (0%)
Frame = +2
Query: 8 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 187
Y S+TTFSP G++ QIEYA AV GT VGIK +G+V+ E S + S ++
Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67
Query: 188 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 367
+ H GM +G+ D R +V +A+ A+ Y +Y + +P +L +RVA+ + T
Sbjct: 68 HSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYW 127
Query: 368 GVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELD 547
+RPFG +++ G++ D P L+ +PSG + + A+GK KT +EK ++
Sbjct: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCK 187
Query: 548 DAV-HTAILTLKEGFEGQMTADNIEVG-ICDAS 640
+ V A + K E + A +E+ IC+ S
Sbjct: 188 EGVIEVAKIIYKLHDEAKDKAFELEMSWICEES 220
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 245 LLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWENDRP 424
+LV +A+ ++ E T++L+Q +++ + Y V + + GW+ +
Sbjct: 312 MLVLPLEFLAKDGVVLVGEKKVTSKLLQTSSSMEKMYKIDDHV-----ACAVAGWDRNHG 366
Query: 425 Y-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKE 583
+ L+ DPSG Y W+A A+G N ++ L++ Y +D ++ V AI L +
Sbjct: 367 FQLYMSDPSGNYGGWQAAAVGANNQAAQSILKQDYKDDATREEVVQLAIKVLSK 420
>At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1)
(PRCD) identical to cDNA proteasome subunit prcd
GI:2511593
Length = 233
Score = 33.9 bits (74), Expect = 0.100
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Frame = +2
Query: 86 GGTSVGIKASNGVVIATENKHKSILY-DEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQA 262
G T +G+ + GVV+ +++ + +Y + +K+ +T ++ + SG D +++
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 263 RKMAQQYYLMYHEPIP---TAQLVQRVATVMQEYTQSG 367
R Q+ + + +P +A L++ +A + Q+G
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTG 109
>At2g27680.1 68415.m03354 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 384
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 50 VQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMIT 199
V + Y L GG+ +G++ I N S++ DE VN ++ +T
Sbjct: 315 VAVRYVLDQQGVGGSMIGVRLGLAEHIQDANAIFSLVLDEEDVNSIQEVT 364
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +2
Query: 5 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSV------GIKASNGVVIATENKHKSILYD 166
RY S +G V ++ AA A+G +++ IK V+ A EN + +
Sbjct: 233 RYKHSYNHKEDAGGSVVVQALSAATASGCSALVTMPVDTIKTRLQVLDAEENGRRRAMTV 292
Query: 167 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQY 283
SV + M G +G Y G+GP + + A M Y
Sbjct: 293 MQSVKSL-MKEGGVGACYRGLGPRWVSMSMSATTMITTY 330
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 38 SGKLVQIEYALAAVAAGGTSVGIKASNGVVI 130
S +++Q+EY + +A+ G+ V + SNG ++
Sbjct: 76 SNQVIQLEYTIPYLASNGSRVSVGYSNGDIL 106
>At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 405
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 238 LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER 417
LS+ + ++E P VL V RA+ A S D+ + P F + T L LG+
Sbjct: 34 LSAGTYRTEEGKPLVLDVVRRAEQQLA-NDLSRDKE--YLPLNGLPEFNKLSTKLILGDD 90
Query: 418 SPLL 429
SP L
Sbjct: 91 SPAL 94
>At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 403
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 238 LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER 417
LS+ + ++E P VL V RA+ A D + P F + T L LG+
Sbjct: 34 LSAGTYRTEEGKPLVLDVVRRAEQQLA-----NDLDKEYLPLNGLPEFNKLSTKLILGDD 88
Query: 418 SPLL 429
SP L
Sbjct: 89 SPAL 92
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 190 NDYWPYRNGVLRHGP*LSSARHTSQENGPTVLPDVPRADTH-SAVGPASGDRHARI-YSI 363
+DY YRN GP A S E P L R D H PA+ +R A + + I
Sbjct: 698 DDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEI 757
Query: 364 RRR 372
++R
Sbjct: 758 QKR 760
>At4g24020.1 68417.m03452 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 959
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 509 FLEKRYTEDLELDDAVHTAILTLKEGFEGQMTADNIEVG 625
FL T+D E D + + ++T+KE F+ A ++ G
Sbjct: 470 FLPSSITDDQEQDLLLGSILVTMKEHFQSLRVASGVDFG 508
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 TSQENGP--TVLPDVPRADTHSAVGPASGDRHARIYSIRRRPS 378
TS+ N T P++ +DT SA GP + AR+ S+ PS
Sbjct: 473 TSEGNAAASTTEPELALSDTDSASGPTPCNHDARLSSVASVPS 515
>At3g04370.1 68416.m00462 hypothetical protein contains Pfam profile
PF01657: Domain of unknown function
Length = 332
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 434 QCDPSGAYFAWKATAMGKNFNNGKTFL 514
QCDP A KAT N++N FL
Sbjct: 38 QCDPLDANILQKATTKSPNYSNQNLFL 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,302,242
Number of Sequences: 28952
Number of extensions: 340056
Number of successful extensions: 941
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -