Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_P05
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 586 VLNLWKTVLNIRCIHCDI 533
           ++N W+ V NI+C + D+
Sbjct: 602 MINQWENVTNIQCPNADL 619


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 586 VLNLWKTVLNIRCIHCDI 533
           ++N W+ V NI+C + D+
Sbjct: 602 MINQWENVTNIQCPNADL 619


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 569  LPQIQDTPMIVLVDLKDIRDKL 634
            L  I+D    V  +LKD+RDK+
Sbjct: 1204 LHPIEDDKKKVSAELKDLRDKM 1225


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 569  LPQIQDTPMIVLVDLKDIRDKL 634
            L  I+D    V  +LKD+RDK+
Sbjct: 1204 LHPIEDDKKKVSAELKDLRDKM 1225


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 177 IWLLWCSE 200
           IW LWCS+
Sbjct: 570 IWPLWCSQ 577


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -1

Query: 193 HHKSQIYFLHPRNFW 149
           HH   +Y  HP   W
Sbjct: 151 HHLGSVYSRHPYESW 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,622
Number of Sequences: 336
Number of extensions: 2744
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)