Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_P05
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8217| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_49460| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96) 34 0.11
SB_26145| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 31 0.60
SB_4795| Best HMM Match : CLN3 (HMM E-Value=0.058) 31 1.0
SB_8395| Best HMM Match : Arm (HMM E-Value=2.3) 30 1.4
SB_56781| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 29 2.4
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 29 2.4
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 29 2.4
SB_27411| Best HMM Match : RVT_1 (HMM E-Value=0.002) 29 3.2
SB_8206| Best HMM Match : Kunitz_legume (HMM E-Value=3) 29 3.2
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77) 29 4.2
SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_56011| Best HMM Match : Exo_endo_phos (HMM E-Value=0.13) 28 7.4
SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22) 28 7.4
SB_46984| Best HMM Match : Exo_endo_phos (HMM E-Value=4.2e-09) 28 7.4
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.4
SB_41253| Best HMM Match : Exo_endo_phos (HMM E-Value=4.5e-09) 28 7.4
SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016) 28 7.4
SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012) 28 7.4
SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27) 28 7.4
SB_53681| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 28 7.4
SB_33470| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_33188| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4) 28 7.4
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 28 7.4
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 28 7.4
SB_23750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_58429| Best HMM Match : WSC (HMM E-Value=0.17) 27 9.7
SB_3855| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_8217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 35.9 bits (79), Expect = 0.028
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N+ Y GNY S G N+ + G N SS + G
Sbjct: 41 SQYTGGNNYSSQYTGGNYYSSQFTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 97
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 98 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 136
Score = 35.5 bits (78), Expect = 0.037
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S FT N Y GNY S G N+ + G N SS + G
Sbjct: 61 SQFTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 117
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 118 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 156
Score = 35.1 bits (77), Expect = 0.049
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 241 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQCTGGN 297
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 298 YYSSQFTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTSG 336
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +1
Query: 358 YGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGGTYSASDSQSSRY 537
Y GNY S G N+ + G N SS + G YS+ + + Y
Sbjct: 13 YTGGNYYSSQYTGGNYYSS---QYTGVNYYSSQYTGGNNYSSQYTGGNYYSSQFTGGNYY 69
Query: 538 HSGYNGYSGQSSTNSGHTYDSSGRSQG 618
S Y G + SS +G Y SS + G
Sbjct: 70 SSQYTGGNYYSSQYTGGNYYSSQYTGG 96
Score = 34.7 bits (76), Expect = 0.064
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 271 SQYTGGNYYSSQYTGGNYYSSQCTGGNYYSS---QFTGGNYYSSQYTGGNYYSSQYTGGN 327
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSS 603
YS+ + + Y S Y G + SS +G Y SS
Sbjct: 328 YYSSQYTSGNYYSSQYTGGNYYSSQYTGGNYYSS 361
Score = 34.7 bits (76), Expect = 0.064
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S FT N Y GNY S G N+ + G N SS + G
Sbjct: 301 SQFTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTSGNYYSSQYTGGNYYSSQYTGGN 357
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSS 603
YS+ + + Y S Y G + SS +G Y SS
Sbjct: 358 YYSSQYTGVNYYSSQYTGGNYYSSQYTGGNYYSS 391
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 11 SQYTGGNYYSSQYTGGNYYSSQYTGVNYYSS---QYTGGNNYSSQYTGGNYYSSQFTGGN 67
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 68 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 106
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 71 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 127
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 128 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 166
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 81 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 137
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 138 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 176
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 91 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 147
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 148 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 186
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 101 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 157
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 158 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 196
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 111 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 167
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 168 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 206
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 121 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 177
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 178 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 216
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 131 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 187
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 188 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 226
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 141 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 197
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 198 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 236
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 151 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 207
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 208 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 246
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 161 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 217
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 218 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 256
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 171 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 227
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 228 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 266
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 181 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 237
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 238 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 276
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ + G N SS + G
Sbjct: 191 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 247
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 248 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 286
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N + GNY S G N+ + G N SS + G
Sbjct: 51 SQYTGGNYYSSQFTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTGGN 107
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS +G Y SS + G
Sbjct: 108 YYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGG 146
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y SGNY S G N+ + G N SS + G
Sbjct: 321 SQYTGGNYYSSQYTSGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTGVNYYSSQYTGGN 377
Query: 502 TYSASDSQSSRYHSGYNGY 558
YS+ + + Y S Y GY
Sbjct: 378 YYSSQYTGGNYYSSQYTGY 396
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 367 GNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGGTYSASDSQSSRYHSG 546
GNY S G N+ + G N SS ++G YS+ + + Y S
Sbjct: 296 GNYYSSQFTGGNYYSS---QYTGGNYYSSQYTGGNYYSSQYTSGNYYSSQYTGGNYYSSQ 352
Query: 547 YNGYSGQSSTNSGHTYDSSGRSQG 618
Y G + SS +G Y SS + G
Sbjct: 353 YTGGNYYSSQYTGVNYYSSQYTGG 376
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/87 (26%), Positives = 33/87 (37%)
Frame = +1
Query: 358 YGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGGTYSASDSQSSRY 537
+ GNY S G N+ + N SS + G YS+ + + Y
Sbjct: 303 FTGGNYYSSQYTGGNYYSS---QYTGGNYYSSQYTSGNYYSSQYTGGNYYSSQYTGGNYY 359
Query: 538 HSGYNGYSGQSSTNSGHTYDSSGRSQG 618
S Y G + SS +G Y SS + G
Sbjct: 360 SSQYTGVNYYSSQYTGGNYYSSQYTGG 386
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 SVFTAANS-KGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGG 501
S +T N Y GNY S G N+ G N SS + G
Sbjct: 251 SQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGGNYYSSQCT---GGNYYSSQFTGGN 307
Query: 502 TYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
YS+ + + Y S Y G + SS + Y SS + G
Sbjct: 308 YYSSQYTGGNYYSSQYTGGNYYSSQYTSGNYYSSQYTGG 346
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 457 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSST-NSGHTYDSSGRSQGY 621
+ G N SS + G YS+ + + Y S Y G + SS G+ Y S Y
Sbjct: 3 YTGGNYYSSQYTGGNYYSSQYTGGNYYSSQYTGVNYYSSQYTGGNNYSSQYTGGNY 58
>SB_49460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 34.7 bits (76), Expect = 0.064
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 466 YNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGY 621
YNT S A TY+ S SQ++RY YN S +T HTY+++ ++ Y
Sbjct: 86 YNTTSQATRYVHTYNTSTSQATRYVHTYNTTS--QATLYVHTYNTTSQATRY 135
>SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96)
Length = 772
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +1
Query: 469 NTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQG 618
N SS+LSNG + S S SS +G + Y+G S TN G ++G SQG
Sbjct: 262 NGFSSSLSNGMSPSLSQGLSSSLSNGLSSYTGGSDTN-GLGSLAAGYSQG 310
>SB_26145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 466 YNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGY 621
YNT S A+ + TY+ + SQ++RY YN S +T HTY+++ ++ Y
Sbjct: 74 YNTTSQAIRHVHTYNTT-SQATRYVHTYNTTS--QATRYVHTYNTTSQAIRY 122
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 469 NTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDS 600
NT+ + N S++ S S + SGYN S+T+S T++S
Sbjct: 223 NTKCTKSRNTSKPSSTTSSKSTFESGYNNSKPSSTTSSKSTFES 266
>SB_4795| Best HMM Match : CLN3 (HMM E-Value=0.058)
Length = 878
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 2/104 (1%)
Frame = +1
Query: 319 TGSVFTAANSKGVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNG 498
TGS+ + G Y NY ++ G N+ + G N +A + G
Sbjct: 273 TGSLLYQDSVPGAYTGSNYTMTAYTGSNY---TMTAHTGSSYTMTAYTGSNYTMTAYT-G 328
Query: 499 GTYSASDSQSSRY-HSGYNGYSGQSSTNSGHTYDSSGRS-QGYT 624
Y + S Y + Y GY+ + +G Y + R+ YT
Sbjct: 329 FNYIMTAYTGSNYTMTAYTGYNNTMTAYTGSNYTMTARTGSSYT 372
>SB_8395| Best HMM Match : Arm (HMM E-Value=2.3)
Length = 412
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +1
Query: 460 AGYNTQSSALSNGGTYS---ASDSQSSRYHSGYNGYS 561
AGY T S L+ GTYS A SRY +GY YS
Sbjct: 285 AGYGTYSRYLAGYGTYSRYLAGYGTYSRYLAGYGTYS 321
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +1
Query: 460 AGYNTQSSALSNGGTYS---ASDSQSSRYHSGYNGYS 561
AGY T S L+ GTYS A SRY +GY YS
Sbjct: 295 AGYGTYSRYLAGYGTYSRYLAGYGTYSRYLAGYGTYS 331
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +1
Query: 460 AGYNTQSSALSNGGTYS---ASDSQSSRYHSGYNGYS 561
AGY T S L+ GTYS A SRY GY YS
Sbjct: 305 AGYGTYSRYLAGYGTYSRYLAGYGTYSRYPVGYGTYS 341
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +1
Query: 463 GYNTQSSALSNGGTYS---ASDSQSSRYHSGYNGYS 561
GY T S L+ GTYS A SRY +GY YS
Sbjct: 276 GYGTYSRYLAGYGTYSRYLAGYGTYSRYLAGYGTYS 311
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +1
Query: 460 AGYNTQSSALSNGGTYS---ASDSQSSRYHSGYNGYS 561
AGY T S L+ GTYS SRY +GY YS
Sbjct: 315 AGYGTYSRYLAGYGTYSRYPVGYGTYSRYLAGYGTYS 351
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +1
Query: 463 GYNTQSSALSNGGTYS---ASDSQSSRYHSGYNGYS 561
GY T S L+ GTYS A SRY +GY YS
Sbjct: 336 GYGTYSRYLAGYGTYSRYLAGYGTYSRYLAGYGTYS 371
>SB_56781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 538 HSGYNGYSGQSSTNSGHTYDSSGRSQGYTG 627
H G GY+G S +G T +G ++GYTG
Sbjct: 7 HGGTRGYTGGSRGYTGGTRGYTGGTRGYTG 36
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 505 YSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTG 627
Y+ + Y G GY+G + +G T +G ++GYTG
Sbjct: 3 YTGVHGGTRGYTGGSRGYTGGTRGYTGGTRGYTGGTRGYTG 43
>SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 457 HAGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSG--HTYDSSGRSQ 615
H GY S S+GG+ S S YH G+S + H YD SG Q
Sbjct: 498 HQGYGRHDSHASHGGSVS-SGRHREEYHHKRGGHSHDRHHHGYYIHKYDHSGARQ 551
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 472 TQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSS--GRSQGYTG 627
T++ + +GG A + + H GY+G TN GH DSS G G+ G
Sbjct: 2049 TENITIDDGGAMIADELGYNSSH-GYSGRGLYGDTNPGHGKDSSFGGSGAGHGG 2101
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 535 YHSGYNGYSGQSSTNSGHTYDSSGRSQGYTG 627
Y+SGYN +G N TY+ G +GY G
Sbjct: 508 YNSGYNHMNGPQGYNGPQTYE--GHQEGYEG 536
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 460 AGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSS 603
+ YN SS GG SSR G SG +S + G +Y SS
Sbjct: 458 SSYNNSSSMNGYGGGSGYGGGSSSRGGGGGRSSSGGNSRSGGSSYKSS 505
>SB_27411| Best HMM Match : RVT_1 (HMM E-Value=0.002)
Length = 698
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 640 CFQLVPY-ILEIDQNYHRCVLNLWKTVLNIRCIHCDILSFEN 518
CF +VP+ I + +HR + L++ + + IH DIL + N
Sbjct: 304 CFSMVPFGISSPPEVFHRTIAQLFEGMDGVTSIHDDILVWGN 345
>SB_8206| Best HMM Match : Kunitz_legume (HMM E-Value=3)
Length = 504
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Frame = -1
Query: 268 HPFGVALNHPYCARVQNSLPYFPSEHHKSQIYFLHP------RNFWNIGNLLFLGTVQVL 107
H GV LN PY RV +P F H + H + + + L V V
Sbjct: 142 HCPGVRLNKPYAVRVPMDIPVFTGTHADFLVVVFHKITTTGHQRLQPLFDCLLTIIVNVS 201
Query: 106 PQLKLISQLKA 74
P LK +S + A
Sbjct: 202 PYLKSLSMVAA 212
>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
Length = 872
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Frame = +1
Query: 352 GVYGSGNYDLSNLEGRNFQEGVXXXXXXXXXXXXXHAGYNTQSSALSNGGTYSASDSQSS 531
G Y GNY N N+ +G +A N S + GG Y+ +
Sbjct: 59 GYYAGGNYAGGNYTDGNYADG--------YYAGGNYADGNHDDSNYA-GGNYTGGNYADG 109
Query: 532 RYHSGY--NGYSGQSSTNSGHTYDSSGRSQGYTG 627
Y GY GY + G+ D + YTG
Sbjct: 110 NYTDGYYAGGYYADGNYAGGNYADGNHIDGNYTG 143
>SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2631
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 490 SNGGTYSASDSQSSRYHSGYNGYSGQSSTN-SGHTYDSS 603
S+GG + S S G +G S +SSTN SG++ +SS
Sbjct: 819 SSGGASGGAGSSSGGASGGADGGSNKSSTNQSGNSSESS 857
>SB_56011| Best HMM Match : Exo_endo_phos (HMM E-Value=0.13)
Length = 307
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 42 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 83
>SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22)
Length = 726
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 112 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 153
>SB_46984| Best HMM Match : Exo_endo_phos (HMM E-Value=4.2e-09)
Length = 476
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 93 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 134
>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1858
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 863 KVAEGVEYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 904
>SB_41253| Best HMM Match : Exo_endo_phos (HMM E-Value=4.5e-09)
Length = 404
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 93 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 134
>SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016)
Length = 606
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 457 HAGYNTQSSALSNGGTYSASDSQSSR--YHSGY-NGYSGQSSTN 579
H Y++ +S+LS + SDSQSS Y G Y G SS N
Sbjct: 278 HQRYSSSTSSLSANQSSMTSDSQSSTRDYQVGITESYQGNSSGN 321
>SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 93 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 134
>SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
Length = 826
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 438 KVAEGVEYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 479
>SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27)
Length = 492
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 493 NGGTYSASDSQSSRYHS-GYN-GYSGQSSTNSGHTYDSSGRSQGYTGQ 630
N Y+ + ++ Y+S GYN GY+ + +G+ YD R+ GY G+
Sbjct: 389 NNNVYNNGYNNNNGYNSNGYNNGYNYNNGYYNGY-YDRYNRNNGYYGR 435
>SB_53681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 535 YHSGYN-GYSGQSSTNSGHTYDSSGRSQGYTGQVEN 639
YHSG Y G + SG T + SG + Y+G N
Sbjct: 133 YHSGMTRNYPGMTWNYSGMTRNYSGMTWNYSGMTRN 168
>SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 623 KVAEGVEYLPSEN-RNIIWCKLKRNYFETEKDIFLGTVYFSPQ 664
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 496 GGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTG 627
G Y S++ S ++GY GYS + N G+ +S +S GY G
Sbjct: 1368 GSGYQGSNNAYS--NNGYQGYSNANINNQGNI--NSYQSNGYQG 1407
>SB_33470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 517 DSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQ 630
DS + +G GY+G S + YD GR +GY G+
Sbjct: 13 DSLNDSRRTGDRGYNGYRSPDD--YYDRRGRDRGYDGR 48
>SB_33188| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4)
Length = 200
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 93 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 134
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 475 QSSALSNGGTYSASDSQSSRYHSGYN-GYSGQSSTNSGHTYDSSGRS--QGYTG 627
QS A GG +S S YH G G+ G T G + G S +G+ G
Sbjct: 151 QSRAGGTGGNPGECNSAGSSYHGGVGAGWDGTGCTRLGPEHGERGGSIEKGWVG 204
>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
Length = 1012
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 229 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 101
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 684 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 725
>SB_23750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 535 YHSGYN-GYSGQSSTNSGHTYDSSGRSQGYTGQVEN 639
YHSG Y G + SG T + SG + Y+G N
Sbjct: 133 YHSGMTRNYPGMTWNYSGMTRNYSGMTWNYSGMTRN 168
>SB_58429| Best HMM Match : WSC (HMM E-Value=0.17)
Length = 115
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 460 AGYNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYT 624
AG L+NGG +S S +S Y S + + SST+ + + G G T
Sbjct: 50 AGRGYSVFILNNGGECRSSSSAASNYASRPDEFCSYSSTSGCILFGTHGDCSGRT 104
>SB_3855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 514 SDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQ 630
S S SRY+ + G S QS N G S G S+G +G+
Sbjct: 939 SVSLDSRYNELFTGRSLQSCGNQGTGVLSGGGSRGLSGR 977
>SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 969
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 202 PSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLP 104
P EH K I P + W+IG LLFL +Q +P
Sbjct: 44 PKEHRKPLI---PPDDRWSIGVLLFLYVLQGIP 73
>SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = -1
Query: 568 TVLNIRCIHCDILSFENHWRCKFRRYLMQTIVCYSLHEMIKKIGIASHQKKRLL 407
+V+N+ C+++SF +C+ R + + + +H + + + Q K LL
Sbjct: 406 SVMNLNITICEVMSFFLECKCENSRAWITNLEEFVVHALTSNLSLNVEQVKSLL 459
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,864,539
Number of Sequences: 59808
Number of extensions: 335981
Number of successful extensions: 1043
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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