Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_P04
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            24   0.85 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   1.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   3.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.5  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   6.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   6.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.0  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.9  

>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 315 HHALCHVHRAPCGNNFIHSHLRI 383
           HH    VH  P GN+ + S + I
Sbjct: 65  HHKFFQVHEWPVGNDTLKSKMEI 87


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 214 NRTRPRHLQLYHRGATSSGASSLLYPALL 128
           N T P ++ LY+R + +    +L+  ALL
Sbjct: 308 NSTNPPNILLYYRDSLALSVFALILTALL 336


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 9   RHTPRPNNQC*HRKESNQGRARVIRPDTGEETVWI 113
           +H  +  N C   K+ N+    + RP TG+E  W+
Sbjct: 3   KHLTQRINSCDLLKKRNENDPFLKRPITGDEK-WV 36


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 158 RELFAISCAALY 123
           REL A +CAALY
Sbjct: 44  RELNATACAALY 55


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3

Query: 226 ASGANRTRPRHLQLYHRGATSSGASSLLYPALLY 125
           A  A+   PR   L  R  TSS  S + +  L Y
Sbjct: 318 ADDASERNPRSAVLAAREITSSSCSYMAHEKLSY 351


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 209 NSTASSSVISPWRHKFRRELFAISCA 132
           NS  +  + + W   FRR    I CA
Sbjct: 382 NSGMNPVIYACWSRDFRRAFVRILCA 407


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 214 NRTRPRHLQLYHRGATSSGASSLLYP 137
           ++++P H QL+H  +T   A +   P
Sbjct: 805 DQSQPPHQQLHHHQSTHPQAQAQAQP 830


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 70  LVLLDPIREKRLSGLVSEYRAAQDIAKSSRLN 165
           +++LD   +    G+V+++   Q I K+   N
Sbjct: 468 VIILDDEHDDAFIGIVNQFHILQFITKNGTSN 499


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,828
Number of Sequences: 438
Number of extensions: 1881
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)