Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_O24
(537 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 29 0.44
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 1.3
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 27 1.8
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.8
SPBC365.08c |||Der1-like |Schizosaccharomyces pombe|chr 2|||Manual 27 1.8
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 26 3.1
SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomy... 26 4.1
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 26 4.1
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 26 4.1
SPAC4C5.03 |||CTNS domain protein |Schizosaccharomyces pombe|chr... 25 5.4
SPAC8C9.06c |||mitochondrial translation regulator |Schizosaccha... 25 7.2
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 25 7.2
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 25 7.2
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 7.2
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 9.5
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 29.1 bits (62), Expect = 0.44
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 76 YIVLLVFVLNLNCIYRVASAAAKLENQYLYHVY 174
Y+ ++ L+ C + V KLENQY HVY
Sbjct: 659 YVDIMDLQLSDFCSFSVLETLKKLENQYYSHVY 691
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 258 KIVETKIDTVIIYTSMHSTDRRPLLDIGLLQRSPRRTVLRHPHPADSHNL 407
K ++ K + I+YT+MH+T + +L +LR+ H DS+ L
Sbjct: 257 KFLKLKFENEILYTAMHTTSIFKSV-FNILGSFYTMRLLRNKHDGDSYEL 305
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1254
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/41 (21%), Positives = 23/41 (56%)
Frame = +1
Query: 37 EQLRLYLQNNFSFYIVLLVFVLNLNCIYRVASAAAKLENQY 159
E+ + +N+ ++ L+ + +++C + ++ AAA L Y
Sbjct: 934 EKFYIRFDSNYEQWLALIKYTASIDCFFSLSQAAAALGEPY 974
>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 230
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 299 FHAFNRQTSTSGHRSPPKISTTNGLAPPASSGFPQPSPCRRSILTSRIS 445
F + R+ STS S IST++ P SS P + S TS I+
Sbjct: 45 FPSLYRRASTSSSSSSSSISTSHDSQPSTSSSSPSSTSTSSSSGTSVIT 93
>SPBC365.08c |||Der1-like |Schizosaccharomyces pombe|chr 2|||Manual
Length = 224
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +1
Query: 13 YILNILYFEQLRLYLQN-----NFSFYIVLLVFVLNLNCIYRVASAAAKLENQYL 162
+I+NI +F Q YL+N N YI+ LV V L + + S NQ L
Sbjct: 73 FIMNIYFFYQYSTYLENFVFARNAKKYIIYLVKVALLIDAFSLISGLGSALNQSL 127
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 211 SPDVLSEDEVQNGKHDRGT 155
SPD+LSE +V+N K++ T
Sbjct: 57 SPDLLSESDVENAKNNEHT 75
>SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 84 FVSICFKFKLYLSCRVSSSKT*EPVPLSCLP 176
FVS+C + Y + + EP P SCLP
Sbjct: 140 FVSVCEELAKYGNLKNRPKIVWEPTPESCLP 170
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 323 STSGHRSPPKISTTNGLAPPASSGFPQPSPCRRSILTSRIS 445
+ S ++ P+ ST NG+ SSGF + S++ RI+
Sbjct: 395 TNSSNQGDPQASTFNGVPNANSSGFAAHTQDLSSVIPRRIA 435
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 4.1
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = +3
Query: 48 VIFAKQFFFLYCFV 89
++F ++FFFL+CF+
Sbjct: 4 LLFLRRFFFLFCFI 17
>SPAC4C5.03 |||CTNS domain protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 103 LKQILTKQYRKKNCFANITAAVQ 35
L + Y KK CFAN T +Q
Sbjct: 83 LTECCQNYYSKKQCFANTTGLIQ 105
>SPAC8C9.06c |||mitochondrial translation regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 931
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +1
Query: 361 DERS---CATRIQRIPTTFTMSSVHTYFTD 441
DER+ C T R F M +H YF+D
Sbjct: 462 DERTLVICITIFSRRKDLFAMEKIHQYFSD 491
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 282 TVIIYTSMHSTDRRPLLDIGLLQRSPRRTVLRHPHPADSHNLHH 413
T+++Y ++ +D P + +TV + P P D H L++
Sbjct: 248 TILLYPLVYQSDFVPSVSENCTPLELLKTVFQSPAPWDVHQLYN 291
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 284 SNYLYFHAFNRQTSTSGHRSPPKISTTNGLAPPASSGFPQPSP 412
SN+ Y H+ + QTS S PP +S NG P ++ P P
Sbjct: 155 SNFAYSHSSSLQTSASSR--PPVLS--NGSFPRQTNTAPLNPP 193
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 139 LLLTRHDKYNLNLKQILTKQYRKKNCFANITAAVQNI 29
++ +R++KYN QI+ + + NC+ + A +Q I
Sbjct: 236 IVSSRYNKYNFVPLQIIAQFSKTANCYFLLIAIMQMI 272
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +2
Query: 239 QNLKKFENSRNKNRYSNYLYFHAFNRQTSTSGHRSPPKISTTNGLAPPASSGFPQPSPCR 418
Q + + S ++N Y N F + Q + + + P T+ P ++ PQ
Sbjct: 626 QQQQPLQASIDQNPYGNNPLFSSTTSQVAPTSIQEPIASPLTSKPTPKKAASLPQFWLSP 685
Query: 419 RSILTSRISKI 451
RS T+R++ I
Sbjct: 686 RSHNTARLASI 696
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,160,925
Number of Sequences: 5004
Number of extensions: 43632
Number of successful extensions: 154
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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