Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_O24
(537 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10387| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_25038| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.2
SB_2139| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_28962| Best HMM Match : F-box (HMM E-Value=6.3e-10) 29 3.2
SB_4354| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 4.2
SB_20373| Best HMM Match : RDD (HMM E-Value=6.8e-12) 28 4.2
SB_10663| Best HMM Match : Extensin_2 (HMM E-Value=3) 28 4.2
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 4.2
SB_5521| Best HMM Match : SWIM (HMM E-Value=6.9) 28 4.2
SB_34888| Best HMM Match : GHMP_kinases (HMM E-Value=0.72) 28 4.2
SB_35372| Best HMM Match : SpoIIIAC (HMM E-Value=1.3) 28 5.6
SB_18244| Best HMM Match : Fukutin-related (HMM E-Value=3.7) 28 5.6
SB_48438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_31258| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24) 27 9.7
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 27 9.7
SB_13149| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_10387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +3
Query: 270 TKIDTVIIYTSMHSTDRRPLLDIGLLQRSPRRTVLRHPHPADSHNLHHVVG--PYLLHGY 443
T IDT T T + G L PR+ + HP D HNL V Y HG
Sbjct: 501 TTIDTSSSATEKCRTKEELMTRFGRLSFVPRKVSFKGIHPVDDHNLRDDVDDRTYGCHGE 560
Query: 444 QKY 452
KY
Sbjct: 561 SKY 563
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 233 PIQNLKKFENSRNKNRYSNYLYFHAFNRQTSTSGHRSPPKISTTNGLAPP-ASSGFPQPS 409
PIQN +F+ + +Y NY + +Q H+ PP G PP A GF QP
Sbjct: 120 PIQN--EFQAKQAFQQYPNY---QQYQQQYQQYYHQYPPYQQQNPGQFPPTAPPGFNQPP 174
Query: 410 P 412
P
Sbjct: 175 P 175
>SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 311 NRQTSTSGHRSPPKISTTNGLAPP 382
N+Q TS HR P +ST+N PP
Sbjct: 1352 NKQLRTSSHRREPLVSTSNFTPPP 1375
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 401 QPSPCRRSILTSRISKIY*IKLKEFICFRTLFKMKPN 511
QPSPC+R TS I I +K K F R LF+ N
Sbjct: 2491 QPSPCKRRKKTSGILGIGGVKGKRFSQVRKLFERDGN 2527
>SB_25038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1643
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 232 LSALTTISPDVLSEDEVQNGKHDR 161
LSA+ P +LS +++QNG H+R
Sbjct: 877 LSAVVCADPSILSREDMQNGVHNR 900
>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 931
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 288 IIYTSMHSTDRRPLLDIGLLQRSPRRTVLRHPHPADSHNLHHVVGPYLLHGYQKY 452
++ + HS D+ P L R R V + A +H+L+ VVG L+ +K+
Sbjct: 270 LLRRAKHSGDKSPSSPAWLAYRKYRNKVTKALKEAHNHHLNEVVGGSLVSNPKKF 324
>SB_2139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 288 IIYTSMHSTDRRPLLDIGLLQRSPRRTVLRHPHPADSHNLHHVVGPYLLHGYQKY 452
++ + HS D+ P L R R V + A +H+L+ VVG L+ +K+
Sbjct: 56 LLRRAKHSGDKSPSSPAWLAYRKYRNKVTKALKEAHNHHLNEVVGGSLVSNPKKF 110
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 288 IIYTSMHSTDRRPLLDIGLLQRSPRRTVLRHPHPADSHNLHHVVGPYLLHGYQKY 452
++ + HS D+ P L R R V + A +H+L+ VVG L+ +K+
Sbjct: 1660 LLRRAKHSGDKSPSSPAWLAYRKYRNKVTKALKEAHNHHLNEVVGGSLVSNPKKF 1714
>SB_28962| Best HMM Match : F-box (HMM E-Value=6.3e-10)
Length = 447
Score = 28.7 bits (61), Expect = 3.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 392 RWMRVAQDRSSWRSLEETYVQKWTSV 315
+W R+A D S WR+++ + WT++
Sbjct: 31 QWRRIAYDPSLWRTVDLNELLAWTTI 56
>SB_4354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 311 NRQTSTSGHRSPPKISTTNGLAPP 382
N+Q TS HR P +ST+N PP
Sbjct: 66 NKQLHTSPHRREPLLSTSNFTPPP 89
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 311 NRQTSTSGHRSPPKISTTNGLAPP---ASSGFPQPSPCR 418
N +TST+G PP + +G APP SSG P P P R
Sbjct: 186 NSRTSTNG--PPPPPHSRHGSAPPPPERSSGPPPPPPGR 222
>SB_20373| Best HMM Match : RDD (HMM E-Value=6.8e-12)
Length = 434
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 281 YSNYLYFHAFNRQTSTSGHRSPPKISTTNGLAPPASS 391
+ Y Y+ + Q S +G++ PP + NG PP ++
Sbjct: 192 FYTYYYWQMVSSQQSQTGNQGPPGFAGGNGPFPPQNT 228
>SB_10663| Best HMM Match : Extensin_2 (HMM E-Value=3)
Length = 281
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 327 LLDIGLLQRSPRRTVLRHPHPADSHNLH 410
L +I Q +PRRT HPHP S N+H
Sbjct: 99 LKEIQSQQSTPRRTTHPHPHPTIS-NIH 125
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 311 NRQTSTSGHRSPPKISTTNGLAPP---ASSGFPQPSPCR 418
N +TST+G PP + +G APP SSG P P P R
Sbjct: 98 NSRTSTNG--PPPPPHSRHGSAPPPPERSSGPPPPPPGR 134
>SB_5521| Best HMM Match : SWIM (HMM E-Value=6.9)
Length = 150
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 111 LYLSCRVSSSKT*EPVPLSCLPFWTSSSLNTSGE 212
++L+C SK P P SC F T +T GE
Sbjct: 2 VFLACEEGGSKGFRPPPYSCGEFDTRGEFDTCGE 35
>SB_34888| Best HMM Match : GHMP_kinases (HMM E-Value=0.72)
Length = 258
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 16 ILNILYFEQLRLYLQNNFSFYIVLLVFVLNLNCIY 120
+LN YF L+ YL NN Y+ ++ +++ ++
Sbjct: 5 VLNSYYFIVLQQYLANNSKIYLYAGIYAMSVKAVF 39
>SB_35372| Best HMM Match : SpoIIIAC (HMM E-Value=1.3)
Length = 378
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 151 NQYLYHVYRFGPHLHLTHQVRLWSRHLAY 237
+Q+LYHVY H+++TH +R+ Y
Sbjct: 14 DQHLYHVYMTHYHVYMTHYHVYMTRYHVY 42
>SB_18244| Best HMM Match : Fukutin-related (HMM E-Value=3.7)
Length = 540
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 151 NQYLYHVYRFGPHLHLTHQVRLWSRHLAY 237
+Q+LYHVY H+++TH +R+ Y
Sbjct: 14 DQHLYHVYMTHYHVYMTHYHVYMTRYHVY 42
>SB_48438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 27.9 bits (59), Expect = 5.6
Identities = 23/63 (36%), Positives = 26/63 (41%)
Frame = +2
Query: 251 KFENSRNKNRYSNYLYFHAFNRQTSTSGHRSPPKISTTNGLAPPASSGFPQPSPCRRSIL 430
K +R K R N + + A G S KIS A P S P SP RRS
Sbjct: 83 KLIKTRRKERIENIIDYPAM-----LYGSASLAKISRNASPANPRRSPAPYNSPSRRSKS 137
Query: 431 TSR 439
TSR
Sbjct: 138 TSR 140
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 148 QVLLLLTRHDKYNLNLKQILTKQYRKK 68
QVLL+L D Y LN L +YR++
Sbjct: 14 QVLLILALGDSYGLNTPTFLASRYRRQ 40
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 ENSRNKNRYSNYLYFHAFNRQTSTSGHRSPPKISTTNGLAPPA--SSGFPQPSP 412
+ ++ + ++S Y + + +T T G+ +P G PP S G+PQPSP
Sbjct: 554 DGAQVRGKFSPYGQTYVPDHRT-TGGYPAPTPSYPQPGTYPPPHPSGGYPQPSP 606
>SB_31258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 427 YGPTTW*RLWESAGCGWRKTVRRGDLWRRPMSRSG 323
YGPT W + E RRGDLW M + G
Sbjct: 129 YGPTLWYK--EGGPMALHYGTRRGDLWPYTMVQGG 161
>SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)
Length = 1001
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 26 FYILNSCGYICKTIFLSILF 85
F I+ SC ++C TI L++LF
Sbjct: 670 FGIIGSCIFLCTTIILALLF 689
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 335 HRSPPKISTTNGLAPPASSGFPQPSP 412
+ SPP S + L+ P+S+ QPSP
Sbjct: 969 YSSPPSSSQSTFLSSPSSTSLQQPSP 994
>SB_13149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 27.1 bits (57), Expect = 9.7
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 4 KMTYILNILYFEQLRLYLQNNFSFYIVLLVFVLNLNCIYRVASAAAKLENQYLYHV--YR 177
++TY+L+++Y+ ++ +L + I L+ V+ I + YL HV Y
Sbjct: 53 RITYLLHVMYYARIPYFLHVMYYARIPYLLHVMYCTRITYLLHVMYYTRITYLLHVMYYT 112
Query: 178 FGPH-LHLTHQVRL-WSRHLAY 237
P+ LH+ + R+ + H+ Y
Sbjct: 113 RIPYLLHVMYYTRIPYLLHVMY 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,659,553
Number of Sequences: 59808
Number of extensions: 304502
Number of successful extensions: 1140
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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