Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O23
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026187-1|AAH26187.1|  330|Homo sapiens cyclin N-terminal domai...    29   8.5  
AK097456-1|BAC05060.1|  330|Homo sapiens protein ( Homo sapiens ...    29   8.5  

>BC026187-1|AAH26187.1|  330|Homo sapiens cyclin N-terminal domain
           containing 1 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 309 SALMTNVNNRVRCTRVGDNPTWTSVDADFITCALIVVA*SLSLQNHLCY 455
           S L  ++ N       G+   +TSV  DF+  A+ ++A S  +QNH C+
Sbjct: 226 SLLRASIENSTPSQLQGEK--FTSVKEDFMLLAVGIIAASAFIQNHECW 272


>AK097456-1|BAC05060.1|  330|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40137 fis, clone TESTI2012776. ).
          Length = 330

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 309 SALMTNVNNRVRCTRVGDNPTWTSVDADFITCALIVVA*SLSLQNHLCY 455
           S L  ++ N       G+   +TSV  DF+  A+ ++A S  +QNH C+
Sbjct: 226 SLLRASIENSTPSQLQGEK--FTSVKEDFMLLAVGIIAASAFIQNHECW 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,378,270
Number of Sequences: 237096
Number of extensions: 670697
Number of successful extensions: 2203
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2203
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)