Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O20
         (358 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29832| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.36 
SB_23455| Best HMM Match : zf-Sec23_Sec24 (HMM E-Value=7.5)            28   2.6  
SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.5  
SB_50684| Best HMM Match : Toxin_trans (HMM E-Value=4.8)               27   4.5  
SB_46750| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.8  

>SB_29832| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1293

 Score = 30.7 bits (66), Expect = 0.36
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -2

Query: 279  NLIWLVRSTKPRALSL*FSFPVIGTLTIAPEVPSELIVS 163
            NL  +  S  PR LS    FP +G+ TI P   S +IVS
Sbjct: 1187 NLDGVDSSVMPRELSQVLRFPFLGSFTIRPLAQSSVIVS 1225


>SB_23455| Best HMM Match : zf-Sec23_Sec24 (HMM E-Value=7.5)
          Length = 283

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 352 NMSVCEG-SSVAVDIIVN*SSCSGPQFNLVSEINEAKSTELVIFVSSXRYLDH 197
           N  VC     V  DI++N SS     + +V    +    ++VI  SS R+LDH
Sbjct: 23  NRIVCRAFQQVYADIVINESSIRHLDYCVVCRPFQQVYVDIVINDSSIRHLDH 75



 Score = 27.9 bits (59), Expect = 2.6
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 325 VAVDIIVN*SSCSGPQFNLVSEINEAKSTELVIFVSSXRYLDH 197
           V VDI++N SS       +V    +    ++VI  SS R+LDH
Sbjct: 59  VYVDIVINDSSIRHLDHRVVCRAFQQVYADIVINDSSIRHLDH 101


>SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1495

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -1

Query: 352 NMSVCEGSSVAVDIIVN*SSCSGPQFNLVSEINEAKSTELVIFVSSXRYLDHST 191
           N S+C G+    ++      CS    +L S +++A   ++++ V S  Y D ST
Sbjct: 520 NKSICPGAEATFEMRFTEEKCSQDLSSLNSPVSQALVKKIILNVESI-YRDDST 572


>SB_50684| Best HMM Match : Toxin_trans (HMM E-Value=4.8)
          Length = 346

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 128 WTSSRVRRQAGELTINSDGTSGAMVKVPXTGNENHKLSALGFVDLTNQIKL 280
           W   R +  A    +  D T G ++K+P   +  +K S LG    TN+ ++
Sbjct: 48  WKYGRQKMAARRTAMIEDNT-GTVLKIPKKSSAGYKTSKLGMFLATNKRRI 97


>SB_46750| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 327

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 132 PVPGCAGKRVNLQLILMEPQVLWSRYRXLETKITSSVLLASL 257
           P P C G+R NL   L  P   ++R + L +     V L  +
Sbjct: 284 PEPACTGRRKNLLFSLNRPVPAYAREKNLSSSPPRRVKLLQI 325


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,599,645
Number of Sequences: 59808
Number of extensions: 153381
Number of successful extensions: 351
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 560496285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)