Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O20
         (358 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018435-1|AAH18435.1|  238|Homo sapiens damage-regulated autoph...    29   5.6  
BC013773-1|AAH13773.4|  158|Homo sapiens DRAM protein protein.         29   5.6  
AK002121-1|BAA92091.1|  132|Homo sapiens protein ( Homo sapiens ...    29   5.6  
AK126839-1|BAC86716.1|  190|Homo sapiens protein ( Homo sapiens ...    28   9.8  

>BC018435-1|AAH18435.1|  238|Homo sapiens damage-regulated autophagy
           modulator protein.
          Length = 238

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 240 VLLASLISLTKLNWGPLQLD 299
           ++ ASLIS+TKL W P + D
Sbjct: 175 IVCASLISITKLEWNPREKD 194


>BC013773-1|AAH13773.4|  158|Homo sapiens DRAM protein protein.
          Length = 158

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 240 VLLASLISLTKLNWGPLQLD 299
           ++ ASLIS+TKL W P + D
Sbjct: 95  IVCASLISITKLEWNPREKD 114


>AK002121-1|BAA92091.1|  132|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11259 fis, clone PLACE1009045. ).
          Length = 132

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 240 VLLASLISLTKLNWGPLQLD 299
           ++ ASLIS+TKL W P + D
Sbjct: 69  IVCASLISITKLEWNPREKD 88


>AK126839-1|BAC86716.1|  190|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44891 fis, clone BRAMY2044686. ).
          Length = 190

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 228 FSFPVIGTLTIAPEVPSELIVSSPAC 151
           FS PVI    + P +P  + V  PAC
Sbjct: 123 FSLPVISGAGLCPSIPVSISVLGPAC 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,025,225
Number of Sequences: 237096
Number of extensions: 836577
Number of successful extensions: 1300
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)