Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_O18
(510 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 0.93
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 27 1.2
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 27 2.2
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 3.8
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 25 5.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.0
SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr ... 25 6.6
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 25 8.7
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 25 8.7
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.9 bits (59), Expect = 0.93
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +2
Query: 92 LVLVNEHLLKDNLALEFVLEVFATVKQERGVASLIAALKRGQLEGRLLEFLPLN---RRS 262
LVL +LLK+N L+ L+ + V A A + L +L E N R+
Sbjct: 1788 LVLEKTNLLKENSILQADLQSLSRVNNSSSTAQQNAQSQLLSLTAQLQEVREANQTLRKD 1847
Query: 263 EDVLATSFASRGLAELLRLHRAQASQEARRELTQALLDELAEEKPVRDLIQDL 421
+D L +R L +LH + + + DE+ EK V L +L
Sbjct: 1848 QDTLLRE--NRNLER--KLHEVSEQLNKKFDSSARPFDEIEMEKEVLTLKSNL 1896
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 27.5 bits (58), Expect = 1.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 330 CARCNLSSSASPREAN--DVASTSSLRRFRGRNSNNLPSSWPRLSAAISEATPRSCFTV 160
C C+ + P +N + TSSL G S + P P A+SE++ RS F++
Sbjct: 107 CDDCSYNPHYLPVNSNGSSPSHTSSLDSIPGYASGSGPFKTPYRPVAVSESSSRSSFSM 165
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 410 IQDLRDMALKHSIPEHETIAINMAVRYV 493
I DLR ++L H+IP H ++ + VRY+
Sbjct: 375 IWDLRKVSLAHTIPAHSSLVSD--VRYI 400
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 3.8
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -2
Query: 284 TTSPVHPHCDGSEEGTPI-TFPXXXXXXXXXXXXRLRAPASPSRTLPA 144
TT PVHPH + E T + T + + A+ S T PA
Sbjct: 495 TTEPVHPHAVTTNEPTDVSTKSKSAAYHYPATTETVSSKAARSATTPA 542
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.4 bits (53), Expect = 5.0
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 224 GRLLEFLPLNRRSEDVLATSFASRGLAELLRLHR 325
G+LLE++ + ++ LA SFA + + L+ LH+
Sbjct: 135 GQLLEYILARGKLDEDLARSFAMQLINALVYLHK 168
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 5.0
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = -1
Query: 312 SSSASPREANDVASTSSLRRFRGRNSNNLPSSWPRLSAAISEAT 181
SSS+ P ++ S+S G +S+++PS++ +S+ +S +T
Sbjct: 541 SSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST 584
>SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 284
Score = 25.0 bits (52), Expect = 6.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 308 LLRLHRAQASQEARRELTQALLDELAEEKPVRDLIQDLRDMA 433
LLR +R+ ++ A RE+ + D E+ + +L Q +DMA
Sbjct: 168 LLRSNRSGEARTALREVQERHADIKRIERTIAELAQLFQDMA 209
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 24.6 bits (51), Expect = 8.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 318 NLSSSASPREANDVASTSSLRR 253
NLS+SA + DV +TS LRR
Sbjct: 191 NLSTSAKMQFITDVETTSGLRR 212
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 356 LTQALLDELAEEKPVRDLIQDLRDMALKHSI 448
L+Q ++DE+ K ++ L L MAL S+
Sbjct: 371 LSQDMVDEIGRRKLLKSLTNSLSTMALPDSL 401
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,484,602
Number of Sequences: 5004
Number of extensions: 21062
Number of successful extensions: 93
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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