Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_O18
(510 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20) 42 2e-04
SB_25066| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 2.9
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 28 3.9
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007) 27 6.8
SB_52266| Best HMM Match : DUF1665 (HMM E-Value=1.3) 27 9.0
SB_48647| Best HMM Match : Pencillinase_R (HMM E-Value=0.17) 27 9.0
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 27 9.0
>SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20)
Length = 457
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 239 FLPLNRRSEDVLATSFASRGLAELLRLHRAQASQEARRELTQALLDELAEEKPVRDLIQD 418
F P N+++ + F + GL +++ AQ + RR+L L + L E PV+D+I
Sbjct: 168 FFPPNKQTVEHFEKHFKAHGLEKMVSFQLAQKTANTRRQLQTQLKEMLNGETPVKDMIST 227
Query: 419 LRDMALKHSIPEHETIAINMA 481
++ K + E E + + A
Sbjct: 228 CKEEMKKADLLEEEVVFLMYA 248
>SB_25066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1167
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 284 FASRGLAELLR--LHRAQASQEARRELTQALLDELAEEKPVRDLIQDLRDMALKHSIPEH 457
+ S GL ++L+ + R +AS L+ A D+ +E + + D+ D SIP+
Sbjct: 397 YDSLGLKQVLKEEIARIRASGLGTDVLSSAATDDEVKEVTTSNAVLDVLDSIGYMSIPQK 456
Query: 458 ETIAINMAVRYVTRRVE 508
ET+A ++ ++ + ++
Sbjct: 457 ETVASVKSIIHLLKAIK 473
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 17 PQQRIKLARMTALWIGNGCVPPSVLLVLVN 106
P+++ ++ ++ LW NG PP V+ L+N
Sbjct: 92 PEEQGRIVKVLNLWQKNGIFPPEVIQPLIN 121
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 359 TQALLDELAEEKPVRDLIQDLRDMALKHSIPE 454
+Q L DE E KP+ + + D L+H+ PE
Sbjct: 3102 SQKLNDEFQEHKPIIENFNHVSDSLLQHAAPE 3133
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 163 GEAGARSRFADRGAQARPARGKVIGVPSSE 252
G GAR + RGA RP R V G P S+
Sbjct: 268 GARGARGKQGLRGATGRPGRNGVPGRPGSK 297
>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
Length = 881
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 317 LHRAQASQEARRELTQALLDELAEE--KPVRDLIQDLRDMALKHSIPEHETIA 469
+ R + + REL +A ++ +E K + L++ ++ AL+ +PEHE I+
Sbjct: 651 MERKREKLQKERELKKAKREKERDENEKARKTLLELAKEQALEIVVPEHEVIS 703
>SB_52266| Best HMM Match : DUF1665 (HMM E-Value=1.3)
Length = 697
Score = 27.1 bits (57), Expect = 9.0
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 197 AALKRGQLEGRLLEFLP-LNRRSEDVLATSFASRGLAELLRLHRAQASQEARRELTQALL 373
AA+ R QLE R E L LNR ++ A R +AEL R Q +E R + +
Sbjct: 418 AAMLRKQLEARKAEVLARLNREGKE-KAEEERQRQIAEL----RQQKPREFNRPAERPIR 472
Query: 374 DELAEEKP 397
EEKP
Sbjct: 473 PAPREEKP 480
>SB_48647| Best HMM Match : Pencillinase_R (HMM E-Value=0.17)
Length = 1084
Score = 27.1 bits (57), Expect = 9.0
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +2
Query: 191 LIAALKRGQLEGRLLEFLPLNRRSEDVLATSFASRGLAELL--RLHRAQASQEARRELTQ 364
LI AL E L L ++ DV + A + A L LH + +A RE
Sbjct: 268 LIRALNIDHAEASSLPTDALIKKVADVARENRAIKDKATSLARNLHESNMESKASRETIM 327
Query: 365 ALLDELAEEKPVRD 406
L+ E+ +EK D
Sbjct: 328 RLVSEVGQEKKALD 341
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 RRSEDVLATSFA-SRGLAELLRLHRAQASQEARRELTQALLDELAEEKPVRDLIQDLRDM 430
RRS++ L+ +R E +LH Q +EAR E + + +E + + +R ++ R +
Sbjct: 225 RRSDENLSKQLEKARSELEKQKLHEGQKLEEARHEFEKQIQEEGRQLEEMRAELERQRKL 284
Query: 431 ALKHSIPEHETIAINMAVRYVTRRVE 508
H++ V +TR+ E
Sbjct: 285 ---HAMEAQNVEEARQRVSELTRKHE 307
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,669,981
Number of Sequences: 59808
Number of extensions: 174894
Number of successful extensions: 677
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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