Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O18
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    27   0.15 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   1.4  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    23   2.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.2  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   4.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   5.6  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   9.8  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 8   GFEPQQRIKLARMTALWIGNGCVPPSVLLVLVNEH 112
           G +   R  +  ++ +W+G  C+    LL++ NEH
Sbjct: 150 GVKRTPRRMIVYVSLVWLGAACISLPPLLIMGNEH 184


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -1

Query: 285 NDVASTSSLRRFRGR--NSNNLPSSWPRLSAAISEATPR 175
           N + +T++  RF G     N LP+    L  ++S+ TPR
Sbjct: 406 NGLHTTTAHNRFLGGIGGYNGLPTVMSGLDESLSDVTPR 444


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
          protein.
          Length = 90

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 32 KLARMTALWIGNGC 73
          KL RMT  W+G  C
Sbjct: 1  KLWRMTGTWVGGFC 14


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 336 EACARCNLSSSASPREANDVASTSSLRRFRGRNSNN 229
           E C R + +S+ +   AN  AS ++       N+NN
Sbjct: 217 ETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNN 252


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 475 INSNSLVLWYRVLQCHVAQVLDE 407
           +  N L  WY+ LQ H+ +V ++
Sbjct: 32  LRPNFLDGWYQTLQTHMKKVREQ 54


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +2

Query: 98  LVNEHLLKDNLALEFVLEVFATVKQERGVASLIAALKRGQL 220
           +++E  +      +FV+++F T K  + +  L+ A   G+L
Sbjct: 413 IMSEKRIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGEL 453


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/35 (20%), Positives = 17/35 (48%)
 Frame = +2

Query: 2   LKGFEPQQRIKLARMTALWIGNGCVPPSVLLVLVN 106
           ++ F P   + +    + W+G   +P  V L++ +
Sbjct: 204 IQTFAPSTLVVMLSWFSFWLGLDAIPGRVALLVTS 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,743
Number of Sequences: 438
Number of extensions: 1643
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)