Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O16
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical...    29   1.8  
Z92789-6|CAB07218.2|  303|Caenorhabditis elegans Hypothetical pr...    28   4.2  
U55376-1|AAA98003.1|  434|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    28   5.6  
AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U41995-11|AAA83467.1|  665|Caenorhabditis elegans Hypothetical p...    27   9.7  
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical...    27   9.7  
AC024856-1|ABB51172.1|  334|Caenorhabditis elegans Hypothetical ...    27   9.7  

>AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical
           protein K04F10.7 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 366 QCQSIRH*KHAKYSSSSELQHCRCRSGLHVQR*NWC 473
           QCQ  +    AKY      Q+C+  +  H Q+  WC
Sbjct: 25  QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59


>Z92789-6|CAB07218.2|  303|Caenorhabditis elegans Hypothetical
           protein H02I12.4 protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 398 QIFLKFRTSTLSVPEWTTCSKIKLVHLRPPHTPMSLTRNDYSLGRENWNLFK 553
           ++ +K+   TL   +   CS    VHLR PH   +       +  E  N+F+
Sbjct: 2   KLIIKYTVLTLFYAQLINCSGYLEVHLRSPHEQPATVNISTDVQNEESNVFE 53


>U55376-1|AAA98003.1|  434|Caenorhabditis elegans Hypothetical
           protein F16H11.3 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 197 EPRALSLWFSLPVMGTLTIAPEVPSELI 114
           +P  +  W+S   MG+LTIA ++P+  I
Sbjct: 57  KPDGVETWYSKEFMGSLTIASQLPNASI 84


>Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical
           protein R11H6.2 protein.
          Length = 442

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 138 TGGTIRVDSESTRLPAHPRVSPLLRLILILF 46
           TGG  + DS  T LP H  +S L+ LI +++
Sbjct: 301 TGGVTKDDSFVTPLPVHSLISLLIWLICLVY 331


>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
            B0416.1 protein.
          Length = 1203

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -1

Query: 183  ELVVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILIL 49
            + V  + S   +DHSTG     DSEST     P++S   R ++ +
Sbjct: 876  QFVPSLGSVSEVDHSTGEEQSSDSESTTSSLPPKLSLRQRFLVCI 920


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +2

Query: 434 VPEWTTCSKIKL-VHLRPPHTPMSLT 508
           V E   C K+K+ V+ +PPH P+ +T
Sbjct: 258 VREKKNCDKLKINVYFKPPHPPVEIT 283


>AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical
           protein F59A7.1 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +1

Query: 289 THIP----GFGDKMTAAGKVNLFHNNN 357
           +H+P    GFGDK T +  +  F+NNN
Sbjct: 237 SHLPDPRLGFGDKTTGSDSLQKFYNNN 263


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 205 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 306
           L  +MK+  A A +AY  DNVNG    L++   PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215


>Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical
           protein F38C2.5 protein.
          Length = 186

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 397 PNIPQVPNFNTVGAGVDYMFKDKIGASATAAHTD 498
           P +PQ  ++    +G+   F D  GASA+++ TD
Sbjct: 151 PLMPQFSSWFAPSSGLSREFLDNFGASASSSSTD 184


>U41995-11|AAA83467.1|  665|Caenorhabditis elegans Hypothetical
           protein E02C12.10 protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 301 GFG-DKMTAAGKVNL-FHNNNHDFSAKAFATKNMPNIP 408
           GFG DK+   GK    FHN   D S K     N PNIP
Sbjct: 514 GFGEDKLKRLGKTTREFHNREVD-SYKLLMRYNHPNIP 550


>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
           protein B0511.12 protein.
          Length = 1634

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 84  RVSPLLRLILILFDVVTRLFNKHV 13
           R+S    L++ILFD++T  F KH+
Sbjct: 416 RMSSNQNLMVILFDIITSPFRKHL 439


>AC024856-1|ABB51172.1|  334|Caenorhabditis elegans Hypothetical
           protein Y71G10AR.4 protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 218 IWLVRSTEPRALSLWFSLPVMGTLTIA 138
           +W+VRS E R L+++F + V+  +++A
Sbjct: 169 VWVVRSKESRRLTVYFVISVVVLISMA 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.314    0.130    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,249,214
Number of Sequences: 27780
Number of extensions: 311482
Number of successful extensions: 561
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)