Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O15
         (228 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    19   5.0  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    19   8.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    19   8.7  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 134 STAPAVPRTVRCSIQAL*PAR 72
           ++AP  P  VRC+++   P R
Sbjct: 96  TSAPTGPPIVRCALRKHKPNR 116


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
          protein protein.
          Length = 372

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 60 LIAGTCWLKSL 92
          LI   CW KSL
Sbjct: 9  LIVACCWGKSL 19


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
          protein protein.
          Length = 135

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 30 YSSCLFS*SALIAGTC 77
          Y++C++S S +   TC
Sbjct: 11 YATCVYSVSEISEETC 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,782
Number of Sequences: 336
Number of extensions: 547
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3106741
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)