Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O15
         (228 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g28760.2 68417.m04113 expressed protein predicted protein. Ar...    27   2.2  
At4g28760.1 68417.m04112 expressed protein predicted protein. Ar...    27   2.2  
At5g35715.1 68418.m04271 cytochrome P450 71B8, putative (CYP71B8...    25   5.1  

>At4g28760.2 68417.m04113 expressed protein predicted protein.
           Arabidopsis thaliana
          Length = 924

 Score = 26.6 bits (56), Expect = 2.2
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +3

Query: 135 PVPGCAGKRVNL 170
           PVPGC GK VNL
Sbjct: 15  PVPGCLGKMVNL 26


>At4g28760.1 68417.m04112 expressed protein predicted protein.
           Arabidopsis thaliana
          Length = 924

 Score = 26.6 bits (56), Expect = 2.2
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +3

Query: 135 PVPGCAGKRVNL 170
           PVPGC GK VNL
Sbjct: 15  PVPGCLGKMVNL 26


>At5g35715.1 68418.m04271 cytochrome P450 71B8, putative (CYP71B8)
           nearly identical to Cytochrome P450 71B8 (SP:P58048)
           [Arabidopsis thaliana];
          Length = 433

 Score = 25.4 bits (53), Expect = 5.1
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 213 GTLTIAPEVPSELIVSSPA 157
           G LTIA +VP ELI + PA
Sbjct: 410 GALTIAKKVPLELIPTLPA 428


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,043,806
Number of Sequences: 28952
Number of extensions: 51210
Number of successful extensions: 96
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 12,070,560
effective HSP length: 55
effective length of database: 10,478,200
effective search space used: 209564000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)