Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O14
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.3  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   2.3  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   2.3  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   2.3  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   2.3  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   2.3  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   2.3  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   2.3  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   2.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   2.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   3.0  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   5.3  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   9.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.3  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +1

Query: 514  LVHLRPPHTPX-SLTATTT 567
            +VH  PPH+P  +LTATTT
Sbjct: 1362 IVHA-PPHSPQITLTATTT 1379


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393 HNNNHDFSAKAFATKNMPNIPQVP 464
           +NNN++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393 HNNNHDFSAKAFATKNMPNIPQVP 464
           +NNN++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393 HNNNHDFSAKAFATKNMPNIPQVP 464
           +NNN++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393 HNNNHDFSAKAFATKNMPNIPQVP 464
           +NNN++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393 HNNNHDFSAKAFATKNMPNIPQVP 464
           +NNN++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393 HNNNHDFSAKAFATKNMPNIPQVP 464
           +NNN++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393 HNNNHDFSAKAFATKNMPNIPQVP 464
           +NNN++ + K     N+ NI Q+P
Sbjct: 101 YNNNYNTNYKKLQYYNIINIEQIP 124


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393 HNNNHDFSAKAFATKNMPNIPQVP 464
           +NNN++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 384 NLFHNNNHDFSAKAFATKNMPNIPQVP 464
           N ++ NN++++ K +    + NI Q+P
Sbjct: 102 NKYNYNNNNYNKKLYYKNYIINIEQIP 128


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 401 QPRFQCQSIRH*KHAKYSSSSELQHCR 481
           QP F+C+  +     +Y S+  L H R
Sbjct: 418 QPAFRCKPSQRFASGRYYSAYSLHHVR 444


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/28 (32%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 384 NLFHNNNHD-FSAKAFATKNMPNIPQVP 464
           N ++NNN++ ++ K +    + NI Q+P
Sbjct: 331 NNYNNNNYNNYNKKLYYKNYIINIEQIP 358


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 500 HVVHSGTDSVEVRNLRNIWHVFSGE 426
           H  H     V+V NLR    V +GE
Sbjct: 39  HCSHCDRQFVQVANLRRHLRVHTGE 63


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/45 (22%), Positives = 17/45 (37%)
 Frame = +3

Query: 384 NLFHNNNHDFSAKAFATKNMPNIPQVPNFNTVGAGVDYMFKD*IG 518
           +L  N N DF      +   P++   P  ++   G      D +G
Sbjct: 349 HLISNENRDFQTTPTVSVEQPHLFLYPEVSSTYTGFGIQSTDFVG 393


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,114
Number of Sequences: 438
Number of extensions: 3659
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)